Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.63■□□□□ 0.89
NUP43Q8NFH3 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NUP43Q8NFH3 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.63■□□□□ 0.89
NUP43Q8NFH3 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.63■□□□□ 0.89
NUP43Q8NFH3 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NUP43Q8NFH3 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.63■□□□□ 0.89
NUP43Q8NFH3 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.63■□□□□ 0.89
NUP43Q8NFH3 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
NUP43Q8NFH3 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.63■□□□□ 0.89
NUP43Q8NFH3 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
NUP43Q8NFH3 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.63■□□□□ 0.89
NUP43Q8NFH3 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.63■□□□□ 0.89
NUP43Q8NFH3 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
NUP43Q8NFH3 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
NUP43Q8NFH3 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NUP43Q8NFH3 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
NUP43Q8NFH3 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
NUP43Q8NFH3 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
NUP43Q8NFH3 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NUP43Q8NFH3 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NUP43Q8NFH3 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.62■□□□□ 0.89
NUP43Q8NFH3 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.62■□□□□ 0.89
NUP43Q8NFH3 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.62■□□□□ 0.89
NUP43Q8NFH3 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.62■□□□□ 0.89
NUP43Q8NFH3 AC079834.2-201ENST00000609776 1949 ntBASIC20.62■□□□□ 0.89
NUP43Q8NFH3 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NUP43Q8NFH3 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
NUP43Q8NFH3 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NUP43Q8NFH3 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
NUP43Q8NFH3 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NUP43Q8NFH3 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NUP43Q8NFH3 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.62■□□□□ 0.89
NUP43Q8NFH3 AC127496.7-201ENST00000625110 1798 ntBASIC20.62■□□□□ 0.89
NUP43Q8NFH3 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NUP43Q8NFH3 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NUP43Q8NFH3 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.61■□□□□ 0.89
NUP43Q8NFH3 AL499627.2-201ENST00000606283 725 ntBASIC20.61■□□□□ 0.89
NUP43Q8NFH3 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
NUP43Q8NFH3 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NUP43Q8NFH3 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.61■□□□□ 0.89
NUP43Q8NFH3 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NUP43Q8NFH3 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NUP43Q8NFH3 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NUP43Q8NFH3 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NUP43Q8NFH3 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NUP43Q8NFH3 AL512631.2-201ENST00000604634 923 ntBASIC20.6■□□□□ 0.89
NUP43Q8NFH3 AC099791.2-201ENST00000605725 427 ntBASIC20.6■□□□□ 0.89
NUP43Q8NFH3 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.6■□□□□ 0.89
NUP43Q8NFH3 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NUP43Q8NFH3 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
NUP43Q8NFH3 AC087742.1-201ENST00000575880 1738 ntBASIC20.6■□□□□ 0.89
NUP43Q8NFH3 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
NUP43Q8NFH3 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
NUP43Q8NFH3 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NUP43Q8NFH3 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
NUP43Q8NFH3 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NUP43Q8NFH3 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NUP43Q8NFH3 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NUP43Q8NFH3 AC006455.2-201ENST00000429931 906 ntBASIC20.59■□□□□ 0.89
NUP43Q8NFH3 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.59■□□□□ 0.89
NUP43Q8NFH3 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
NUP43Q8NFH3 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
NUP43Q8NFH3 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NUP43Q8NFH3 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
NUP43Q8NFH3 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.58■□□□□ 0.89
NUP43Q8NFH3 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
NUP43Q8NFH3 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
NUP43Q8NFH3 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
NUP43Q8NFH3 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NUP43Q8NFH3 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.58■□□□□ 0.89
NUP43Q8NFH3 SRD5A1P1-201ENST00000442297 786 ntBASIC20.58■□□□□ 0.89
NUP43Q8NFH3 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.58■□□□□ 0.89
NUP43Q8NFH3 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.58■□□□□ 0.89
NUP43Q8NFH3 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.58■□□□□ 0.89
NUP43Q8NFH3 pRNA.6-201ENST00000610482 90 ntBASIC20.58■□□□□ 0.89
NUP43Q8NFH3 pRNA.5-201ENST00000612139 90 ntBASIC20.58■□□□□ 0.89
NUP43Q8NFH3 pRNA.11-201ENST00000618423 90 ntBASIC20.58■□□□□ 0.89
NUP43Q8NFH3 pRNA.13-201ENST00000619112 90 ntBASIC20.58■□□□□ 0.89
NUP43Q8NFH3 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
NUP43Q8NFH3 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
NUP43Q8NFH3 LINC01960-201ENST00000563759 1884 ntBASIC20.58■□□□□ 0.88
NUP43Q8NFH3 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NUP43Q8NFH3 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
NUP43Q8NFH3 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NUP43Q8NFH3 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
NUP43Q8NFH3 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.57■□□□□ 0.88
NUP43Q8NFH3 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NUP43Q8NFH3 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
NUP43Q8NFH3 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NUP43Q8NFH3 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.57■□□□□ 0.88
NUP43Q8NFH3 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.57■□□□□ 0.88
NUP43Q8NFH3 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
NUP43Q8NFH3 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.57■□□□□ 0.88
NUP43Q8NFH3 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.57■□□□□ 0.88
NUP43Q8NFH3 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
NUP43Q8NFH3 EP400NL-214ENST00000641289 2402 ntBASIC20.57■□□□□ 0.88
NUP43Q8NFH3 AC242852.2-201ENST00000615738 1807 ntBASIC20.57■□□□□ 0.88
NUP43Q8NFH3 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.57■□□□□ 0.88
NUP43Q8NFH3 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.57■□□□□ 0.88
NUP43Q8NFH3 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms