Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC27.42■■□□□ 1.98
RTL9Q8NET4 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC27.42■■□□□ 1.98
RTL9Q8NET4 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC27.42■■□□□ 1.98
RTL9Q8NET4 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC27.42■■□□□ 1.98
RTL9Q8NET4 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC27.41■■□□□ 1.98
RTL9Q8NET4 AL353803.4-201ENST00000565882 1934 ntBASIC27.41■■□□□ 1.98
RTL9Q8NET4 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC27.41■■□□□ 1.98
RTL9Q8NET4 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC27.41■■□□□ 1.98
RTL9Q8NET4 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC27.41■■□□□ 1.98
RTL9Q8NET4 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC27.41■■□□□ 1.98
RTL9Q8NET4 ABCB10P4-201ENST00000566803 2184 ntBASIC27.41■■□□□ 1.98
RTL9Q8NET4 AC004687.1-201ENST00000579003 1625 ntBASIC27.41■■□□□ 1.98
RTL9Q8NET4 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
RTL9Q8NET4 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC27.41■■□□□ 1.98
RTL9Q8NET4 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC27.4■■□□□ 1.98
RTL9Q8NET4 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
RTL9Q8NET4 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
RTL9Q8NET4 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC27.4■■□□□ 1.98
RTL9Q8NET4 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
RTL9Q8NET4 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC27.4■■□□□ 1.98
RTL9Q8NET4 AC068587.7-201ENST00000641602 218 ntBASIC27.4■■□□□ 1.98
RTL9Q8NET4 AC105233.4-201ENST00000642045 216 ntBASIC27.4■■□□□ 1.98
RTL9Q8NET4 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC27.4■■□□□ 1.98
RTL9Q8NET4 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
RTL9Q8NET4 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC27.4■■□□□ 1.98
RTL9Q8NET4 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
RTL9Q8NET4 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
RTL9Q8NET4 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC27.4■■□□□ 1.98
RTL9Q8NET4 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
RTL9Q8NET4 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
RTL9Q8NET4 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC27.39■■□□□ 1.98
RTL9Q8NET4 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
RTL9Q8NET4 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC27.39■■□□□ 1.97
RTL9Q8NET4 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC27.39■■□□□ 1.97
RTL9Q8NET4 LINC02228-203ENST00000641970 1355 ntBASIC27.39■■□□□ 1.97
RTL9Q8NET4 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
RTL9Q8NET4 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
RTL9Q8NET4 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC27.38■■□□□ 1.97
RTL9Q8NET4 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
RTL9Q8NET4 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC27.38■■□□□ 1.97
RTL9Q8NET4 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
RTL9Q8NET4 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
RTL9Q8NET4 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
RTL9Q8NET4 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC27.37■■□□□ 1.97
RTL9Q8NET4 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC27.37■■□□□ 1.97
RTL9Q8NET4 MFF-208ENST00000409616 1247 ntTSL 5 BASIC27.37■■□□□ 1.97
RTL9Q8NET4 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC27.37■■□□□ 1.97
RTL9Q8NET4 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
RTL9Q8NET4 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC27.37■■□□□ 1.97
RTL9Q8NET4 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
RTL9Q8NET4 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
RTL9Q8NET4 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC27.36■■□□□ 1.97
RTL9Q8NET4 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
RTL9Q8NET4 NT5C3AP1-201ENST00000394500 1012 ntBASIC27.36■■□□□ 1.97
RTL9Q8NET4 KRT18P14-201ENST00000534205 1250 ntBASIC27.36■■□□□ 1.97
RTL9Q8NET4 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
RTL9Q8NET4 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC27.35■■□□□ 1.97
RTL9Q8NET4 AC004911.1-201ENST00000416316 871 ntBASIC27.35■■□□□ 1.97
RTL9Q8NET4 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC27.35■■□□□ 1.97
RTL9Q8NET4 TPRG1LP1-201ENST00000598702 760 ntBASIC27.35■■□□□ 1.97
RTL9Q8NET4 RARA-203ENST00000394086 2008 ntTSL 2 BASIC27.35■■□□□ 1.97
RTL9Q8NET4 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
RTL9Q8NET4 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
RTL9Q8NET4 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
RTL9Q8NET4 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
RTL9Q8NET4 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC27.35■■□□□ 1.97
RTL9Q8NET4 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC27.35■■□□□ 1.97
RTL9Q8NET4 DLX3-202ENST00000512495 834 ntTSL 2 BASIC27.35■■□□□ 1.97
RTL9Q8NET4 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC27.35■■□□□ 1.97
RTL9Q8NET4 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
RTL9Q8NET4 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
RTL9Q8NET4 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
RTL9Q8NET4 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
RTL9Q8NET4 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC27.34■■□□□ 1.97
RTL9Q8NET4 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC27.34■■□□□ 1.97
RTL9Q8NET4 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC27.34■■□□□ 1.97
RTL9Q8NET4 EI24-211ENST00000534546 1544 ntTSL 2 BASIC27.34■■□□□ 1.97
RTL9Q8NET4 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC27.33■■□□□ 1.97
RTL9Q8NET4 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
RTL9Q8NET4 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC27.33■■□□□ 1.97
RTL9Q8NET4 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC27.33■■□□□ 1.97
RTL9Q8NET4 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC27.33■■□□□ 1.96
RTL9Q8NET4 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC27.33■■□□□ 1.96
RTL9Q8NET4 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC27.32■■□□□ 1.96
RTL9Q8NET4 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC27.32■■□□□ 1.96
RTL9Q8NET4 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
RTL9Q8NET4 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
RTL9Q8NET4 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC27.32■■□□□ 1.96
RTL9Q8NET4 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC27.32■■□□□ 1.96
RTL9Q8NET4 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
RTL9Q8NET4 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC27.32■■□□□ 1.96
RTL9Q8NET4 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC27.32■■□□□ 1.96
RTL9Q8NET4 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
RTL9Q8NET4 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
RTL9Q8NET4 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC27.32■■□□□ 1.96
RTL9Q8NET4 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
RTL9Q8NET4 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC27.31■■□□□ 1.96
RTL9Q8NET4 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
RTL9Q8NET4 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC27.31■■□□□ 1.96
RTL9Q8NET4 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms