Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
SRFBP1Q8NEF9 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SRFBP1Q8NEF9 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
SRFBP1Q8NEF9 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
SRFBP1Q8NEF9 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
SRFBP1Q8NEF9 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
SRFBP1Q8NEF9 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SRFBP1Q8NEF9 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
SRFBP1Q8NEF9 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.01■□□□□ 0.95
SRFBP1Q8NEF9 AC004687.1-201ENST00000579003 1625 ntBASIC21.01■□□□□ 0.95
SRFBP1Q8NEF9 ESRRAP2-201ENST00000418437 1549 ntBASIC21.01■□□□□ 0.95
SRFBP1Q8NEF9 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SRFBP1Q8NEF9 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
SRFBP1Q8NEF9 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.01■□□□□ 0.95
SRFBP1Q8NEF9 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
SRFBP1Q8NEF9 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.01■□□□□ 0.95
SRFBP1Q8NEF9 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21■□□□□ 0.95
SRFBP1Q8NEF9 C9orf163-202ENST00000624034 2573 ntBASIC21■□□□□ 0.95
SRFBP1Q8NEF9 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SRFBP1Q8NEF9 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SRFBP1Q8NEF9 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21■□□□□ 0.95
SRFBP1Q8NEF9 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
SRFBP1Q8NEF9 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21■□□□□ 0.95
SRFBP1Q8NEF9 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SRFBP1Q8NEF9 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SRFBP1Q8NEF9 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
SRFBP1Q8NEF9 HES6-206ENST00000409574 738 ntTSL 2 BASIC21■□□□□ 0.95
SRFBP1Q8NEF9 PTCHD3P2-201ENST00000424937 1205 ntBASIC21■□□□□ 0.95
SRFBP1Q8NEF9 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21■□□□□ 0.95
SRFBP1Q8NEF9 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21■□□□□ 0.95
SRFBP1Q8NEF9 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
SRFBP1Q8NEF9 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21■□□□□ 0.95
SRFBP1Q8NEF9 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SRFBP1Q8NEF9 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SRFBP1Q8NEF9 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SRFBP1Q8NEF9 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
SRFBP1Q8NEF9 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SRFBP1Q8NEF9 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
SRFBP1Q8NEF9 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
SRFBP1Q8NEF9 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SRFBP1Q8NEF9 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21■□□□□ 0.95
SRFBP1Q8NEF9 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
SRFBP1Q8NEF9 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21■□□□□ 0.95
SRFBP1Q8NEF9 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SRFBP1Q8NEF9 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SRFBP1Q8NEF9 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SRFBP1Q8NEF9 AC011298.3-201ENST00000615796 283 ntBASIC20.99■□□□□ 0.95
SRFBP1Q8NEF9 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SRFBP1Q8NEF9 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
SRFBP1Q8NEF9 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SRFBP1Q8NEF9 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SRFBP1Q8NEF9 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
SRFBP1Q8NEF9 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
SRFBP1Q8NEF9 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
SRFBP1Q8NEF9 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SRFBP1Q8NEF9 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.98■□□□□ 0.95
SRFBP1Q8NEF9 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.98■□□□□ 0.95
SRFBP1Q8NEF9 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.98■□□□□ 0.95
SRFBP1Q8NEF9 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SRFBP1Q8NEF9 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SRFBP1Q8NEF9 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.97■□□□□ 0.95
SRFBP1Q8NEF9 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
SRFBP1Q8NEF9 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SRFBP1Q8NEF9 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.97■□□□□ 0.95
SRFBP1Q8NEF9 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
SRFBP1Q8NEF9 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SRFBP1Q8NEF9 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.97■□□□□ 0.95
SRFBP1Q8NEF9 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.97■□□□□ 0.95
SRFBP1Q8NEF9 SERBP1P1-201ENST00000396021 1160 ntBASIC20.97■□□□□ 0.95
SRFBP1Q8NEF9 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SRFBP1Q8NEF9 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
SRFBP1Q8NEF9 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SRFBP1Q8NEF9 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SRFBP1Q8NEF9 AC133561.1-201ENST00000568600 2415 ntBASIC20.97■□□□□ 0.95
SRFBP1Q8NEF9 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SRFBP1Q8NEF9 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SRFBP1Q8NEF9 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SRFBP1Q8NEF9 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.96■□□□□ 0.95
SRFBP1Q8NEF9 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.96■□□□□ 0.95
SRFBP1Q8NEF9 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SRFBP1Q8NEF9 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
SRFBP1Q8NEF9 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SRFBP1Q8NEF9 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SRFBP1Q8NEF9 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SRFBP1Q8NEF9 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.96■□□□□ 0.95
SRFBP1Q8NEF9 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
SRFBP1Q8NEF9 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.96■□□□□ 0.95
SRFBP1Q8NEF9 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SRFBP1Q8NEF9 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.95■□□□□ 0.94
SRFBP1Q8NEF9 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.95■□□□□ 0.94
SRFBP1Q8NEF9 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.95■□□□□ 0.94
SRFBP1Q8NEF9 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SRFBP1Q8NEF9 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
SRFBP1Q8NEF9 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
SRFBP1Q8NEF9 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
SRFBP1Q8NEF9 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SRFBP1Q8NEF9 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SRFBP1Q8NEF9 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.95■□□□□ 0.94
SRFBP1Q8NEF9 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.95■□□□□ 0.94
SRFBP1Q8NEF9 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms