Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.32■■□□□ 1
HIPK4Q8NE63 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.32■■□□□ 1
HIPK4Q8NE63 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HIPK4Q8NE63 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HIPK4Q8NE63 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.32■■□□□ 1
HIPK4Q8NE63 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HIPK4Q8NE63 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.31■■□□□ 1
HIPK4Q8NE63 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC21.31■■□□□ 1
HIPK4Q8NE63 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.31■■□□□ 1
HIPK4Q8NE63 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.31■■□□□ 1
HIPK4Q8NE63 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
HIPK4Q8NE63 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
HIPK4Q8NE63 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
HIPK4Q8NE63 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
HIPK4Q8NE63 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
HIPK4Q8NE63 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.31■■□□□ 1
HIPK4Q8NE63 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC21.31■■□□□ 1
HIPK4Q8NE63 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
HIPK4Q8NE63 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
HIPK4Q8NE63 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.31■■□□□ 1
HIPK4Q8NE63 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.31■■□□□ 1
HIPK4Q8NE63 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
HIPK4Q8NE63 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
HIPK4Q8NE63 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HIPK4Q8NE63 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.3■■□□□ 1
HIPK4Q8NE63 HSD17B1P1-201ENST00000590052 955 ntBASIC21.3■■□□□ 1
HIPK4Q8NE63 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HIPK4Q8NE63 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
HIPK4Q8NE63 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
HIPK4Q8NE63 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.3■■□□□ 1
HIPK4Q8NE63 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
HIPK4Q8NE63 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HIPK4Q8NE63 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.29■■□□□ 1
HIPK4Q8NE63 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
HIPK4Q8NE63 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.29■■□□□ 1
HIPK4Q8NE63 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.29■■□□□ 1
HIPK4Q8NE63 AC026310.3-201ENST00000625186 2373 ntBASIC21.29■■□□□ 1
HIPK4Q8NE63 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
HIPK4Q8NE63 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.29■■□□□ 1
HIPK4Q8NE63 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HIPK4Q8NE63 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
HIPK4Q8NE63 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
HIPK4Q8NE63 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
HIPK4Q8NE63 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HIPK4Q8NE63 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HIPK4Q8NE63 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.29■■□□□ 1
HIPK4Q8NE63 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.29■■□□□ 1
HIPK4Q8NE63 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.28■■□□□ 1
HIPK4Q8NE63 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
HIPK4Q8NE63 AC079630.1-202ENST00000618127 1840 ntBASIC21.28■■□□□ 1
HIPK4Q8NE63 KRT18P60-201ENST00000312876 1297 ntBASIC21.28■■□□□ 1
HIPK4Q8NE63 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.28■■□□□ 1
HIPK4Q8NE63 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.28■■□□□ 1
HIPK4Q8NE63 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HIPK4Q8NE63 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.28■■□□□ 1
HIPK4Q8NE63 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
HIPK4Q8NE63 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HIPK4Q8NE63 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.28■■□□□ 1
HIPK4Q8NE63 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HIPK4Q8NE63 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HIPK4Q8NE63 AC080038.3-201ENST00000623346 1952 ntBASIC21.27■■□□□ 1
HIPK4Q8NE63 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HIPK4Q8NE63 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
HIPK4Q8NE63 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.27■■□□□ 1
HIPK4Q8NE63 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HIPK4Q8NE63 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HIPK4Q8NE63 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC21.27■■□□□ 1
HIPK4Q8NE63 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HIPK4Q8NE63 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HIPK4Q8NE63 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HIPK4Q8NE63 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■□□□□ 0.99
HIPK4Q8NE63 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
HIPK4Q8NE63 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
HIPK4Q8NE63 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
HIPK4Q8NE63 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
HIPK4Q8NE63 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HIPK4Q8NE63 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
HIPK4Q8NE63 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.26■□□□□ 0.99
HIPK4Q8NE63 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HIPK4Q8NE63 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC21.26■□□□□ 0.99
HIPK4Q8NE63 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
HIPK4Q8NE63 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
HIPK4Q8NE63 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HIPK4Q8NE63 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HIPK4Q8NE63 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
HIPK4Q8NE63 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HIPK4Q8NE63 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HIPK4Q8NE63 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HIPK4Q8NE63 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HIPK4Q8NE63 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HIPK4Q8NE63 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.25■□□□□ 0.99
HIPK4Q8NE63 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.25■□□□□ 0.99
HIPK4Q8NE63 AC073130.3-201ENST00000624389 2278 ntBASIC21.25■□□□□ 0.99
HIPK4Q8NE63 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
HIPK4Q8NE63 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HIPK4Q8NE63 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.25■□□□□ 0.99
HIPK4Q8NE63 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HIPK4Q8NE63 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.25■□□□□ 0.99
HIPK4Q8NE63 AC022616.5-201ENST00000518796 181 ntBASIC21.25■□□□□ 0.99
HIPK4Q8NE63 AC019171.1-201ENST00000601251 1056 ntBASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms