Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC24.95■■□□□ 1.58
RETREG2Q8NC44 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC24.95■■□□□ 1.58
RETREG2Q8NC44 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
RETREG2Q8NC44 YBX1P1-201ENST00000445822 960 ntBASIC24.95■■□□□ 1.58
RETREG2Q8NC44 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
RETREG2Q8NC44 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC24.95■■□□□ 1.58
RETREG2Q8NC44 AC022517.1-201ENST00000592429 346 ntBASIC24.95■■□□□ 1.58
RETREG2Q8NC44 RARRES2P11-201ENST00000635158 484 ntBASIC24.95■■□□□ 1.58
RETREG2Q8NC44 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC24.95■■□□□ 1.58
RETREG2Q8NC44 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
RETREG2Q8NC44 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
RETREG2Q8NC44 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
RETREG2Q8NC44 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC24.94■■□□□ 1.58
RETREG2Q8NC44 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC24.94■■□□□ 1.58
RETREG2Q8NC44 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC24.94■■□□□ 1.58
RETREG2Q8NC44 TSPY26P-201ENST00000476365 1326 ntBASIC24.94■■□□□ 1.58
RETREG2Q8NC44 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC24.94■■□□□ 1.58
RETREG2Q8NC44 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC24.94■■□□□ 1.58
RETREG2Q8NC44 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC24.94■■□□□ 1.58
RETREG2Q8NC44 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC24.94■■□□□ 1.58
RETREG2Q8NC44 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
RETREG2Q8NC44 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC24.94■■□□□ 1.58
RETREG2Q8NC44 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC24.94■■□□□ 1.58
RETREG2Q8NC44 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
RETREG2Q8NC44 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
RETREG2Q8NC44 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
RETREG2Q8NC44 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC24.94■■□□□ 1.58
RETREG2Q8NC44 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC24.93■■□□□ 1.58
RETREG2Q8NC44 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC24.93■■□□□ 1.58
RETREG2Q8NC44 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC24.93■■□□□ 1.58
RETREG2Q8NC44 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC24.93■■□□□ 1.58
RETREG2Q8NC44 AC090192.1-201ENST00000517740 490 ntBASIC24.93■■□□□ 1.58
RETREG2Q8NC44 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
RETREG2Q8NC44 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
RETREG2Q8NC44 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC24.93■■□□□ 1.58
RETREG2Q8NC44 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
RETREG2Q8NC44 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC24.93■■□□□ 1.58
RETREG2Q8NC44 AC079834.2-201ENST00000609776 1949 ntBASIC24.92■■□□□ 1.58
RETREG2Q8NC44 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC24.92■■□□□ 1.58
RETREG2Q8NC44 AICDA-202ENST00000537228 667 ntTSL 5 BASIC24.92■■□□□ 1.58
RETREG2Q8NC44 AL137784.2-201ENST00000607332 1000 ntBASIC24.92■■□□□ 1.58
RETREG2Q8NC44 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC24.92■■□□□ 1.58
RETREG2Q8NC44 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
RETREG2Q8NC44 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
RETREG2Q8NC44 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
RETREG2Q8NC44 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
RETREG2Q8NC44 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC24.91■■□□□ 1.58
RETREG2Q8NC44 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
RETREG2Q8NC44 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
RETREG2Q8NC44 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC24.91■■□□□ 1.58
RETREG2Q8NC44 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
RETREG2Q8NC44 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC24.91■■□□□ 1.58
RETREG2Q8NC44 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
RETREG2Q8NC44 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
RETREG2Q8NC44 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
RETREG2Q8NC44 IKBKGP1-201ENST00000612193 1073 ntBASIC24.91■■□□□ 1.58
RETREG2Q8NC44 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
RETREG2Q8NC44 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC24.91■■□□□ 1.58
RETREG2Q8NC44 ANOS2P-203ENST00000472227 1816 ntBASIC24.91■■□□□ 1.58
RETREG2Q8NC44 C9orf163-202ENST00000624034 2573 ntBASIC24.91■■□□□ 1.58
RETREG2Q8NC44 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
RETREG2Q8NC44 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
RETREG2Q8NC44 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
RETREG2Q8NC44 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
RETREG2Q8NC44 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC24.9■■□□□ 1.58
RETREG2Q8NC44 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC24.9■■□□□ 1.58
RETREG2Q8NC44 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
RETREG2Q8NC44 HACD1-201ENST00000326961 773 ntTSL 2 BASIC24.9■■□□□ 1.58
RETREG2Q8NC44 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC24.9■■□□□ 1.58
RETREG2Q8NC44 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC24.9■■□□□ 1.58
RETREG2Q8NC44 KRT18P5-201ENST00000436075 1291 ntBASIC24.9■■□□□ 1.58
RETREG2Q8NC44 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC24.9■■□□□ 1.58
RETREG2Q8NC44 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC24.9■■□□□ 1.58
RETREG2Q8NC44 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
RETREG2Q8NC44 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC24.9■■□□□ 1.58
RETREG2Q8NC44 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC24.9■■□□□ 1.58
RETREG2Q8NC44 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
RETREG2Q8NC44 AC092068.2-201ENST00000590491 1708 ntBASIC24.89■■□□□ 1.58
RETREG2Q8NC44 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
RETREG2Q8NC44 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
RETREG2Q8NC44 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
RETREG2Q8NC44 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
RETREG2Q8NC44 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
RETREG2Q8NC44 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC24.89■■□□□ 1.58
RETREG2Q8NC44 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC24.89■■□□□ 1.58
RETREG2Q8NC44 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC24.89■■□□□ 1.58
RETREG2Q8NC44 AL358852.1-201ENST00000623174 1268 ntBASIC24.89■■□□□ 1.58
RETREG2Q8NC44 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC24.89■■□□□ 1.58
RETREG2Q8NC44 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
RETREG2Q8NC44 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
RETREG2Q8NC44 GTSE1-AS1-202ENST00000623117 1518 ntBASIC24.89■■□□□ 1.57
RETREG2Q8NC44 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
RETREG2Q8NC44 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
RETREG2Q8NC44 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
RETREG2Q8NC44 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC24.88■■□□□ 1.57
RETREG2Q8NC44 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
RETREG2Q8NC44 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
RETREG2Q8NC44 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
RETREG2Q8NC44 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC24.88■■□□□ 1.57
RETREG2Q8NC44 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms