Protein–RNA interactions for Protein: Q8N9I9

DTX3, Probable E3 ubiquitin-protein ligase DTX3, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX3Q8N9I9 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DTX3Q8N9I9 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
DTX3Q8N9I9 AC139795.1-202ENST00000500444 432 ntBASIC19.4■□□□□ 0.7
DTX3Q8N9I9 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
DTX3Q8N9I9 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
DTX3Q8N9I9 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
DTX3Q8N9I9 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.4■□□□□ 0.7
DTX3Q8N9I9 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
DTX3Q8N9I9 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
DTX3Q8N9I9 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
DTX3Q8N9I9 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
DTX3Q8N9I9 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
DTX3Q8N9I9 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
DTX3Q8N9I9 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
DTX3Q8N9I9 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.39■□□□□ 0.69
DTX3Q8N9I9 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
DTX3Q8N9I9 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
DTX3Q8N9I9 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC19.39■□□□□ 0.69
DTX3Q8N9I9 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC19.39■□□□□ 0.69
DTX3Q8N9I9 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
DTX3Q8N9I9 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
DTX3Q8N9I9 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
DTX3Q8N9I9 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
DTX3Q8N9I9 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
DTX3Q8N9I9 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
DTX3Q8N9I9 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
DTX3Q8N9I9 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
DTX3Q8N9I9 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
DTX3Q8N9I9 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
DTX3Q8N9I9 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
DTX3Q8N9I9 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
DTX3Q8N9I9 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.38■□□□□ 0.69
DTX3Q8N9I9 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC19.38■□□□□ 0.69
DTX3Q8N9I9 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC19.38■□□□□ 0.69
DTX3Q8N9I9 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.38■□□□□ 0.69
DTX3Q8N9I9 AC092053.2-201ENST00000640557 1818 ntBASIC19.38■□□□□ 0.69
DTX3Q8N9I9 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
DTX3Q8N9I9 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
DTX3Q8N9I9 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
DTX3Q8N9I9 AC080038.3-201ENST00000623346 1952 ntBASIC19.37■□□□□ 0.69
DTX3Q8N9I9 AC079630.1-202ENST00000618127 1840 ntBASIC19.37■□□□□ 0.69
DTX3Q8N9I9 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
DTX3Q8N9I9 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.37■□□□□ 0.69
DTX3Q8N9I9 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.37■□□□□ 0.69
DTX3Q8N9I9 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
DTX3Q8N9I9 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC19.37■□□□□ 0.69
DTX3Q8N9I9 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
DTX3Q8N9I9 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
DTX3Q8N9I9 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
DTX3Q8N9I9 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
DTX3Q8N9I9 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
DTX3Q8N9I9 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.36■□□□□ 0.69
DTX3Q8N9I9 AC026310.3-201ENST00000625186 2373 ntBASIC19.36■□□□□ 0.69
DTX3Q8N9I9 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
DTX3Q8N9I9 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
DTX3Q8N9I9 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
DTX3Q8N9I9 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
DTX3Q8N9I9 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
DTX3Q8N9I9 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.36■□□□□ 0.69
DTX3Q8N9I9 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
DTX3Q8N9I9 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
DTX3Q8N9I9 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
DTX3Q8N9I9 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
DTX3Q8N9I9 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC19.35■□□□□ 0.69
DTX3Q8N9I9 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
DTX3Q8N9I9 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
DTX3Q8N9I9 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
DTX3Q8N9I9 IDNK-203ENST00000405990 629 ntTSL 2 BASIC19.35■□□□□ 0.69
DTX3Q8N9I9 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
DTX3Q8N9I9 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
DTX3Q8N9I9 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
DTX3Q8N9I9 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
DTX3Q8N9I9 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
DTX3Q8N9I9 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
DTX3Q8N9I9 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
DTX3Q8N9I9 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
DTX3Q8N9I9 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC19.34■□□□□ 0.69
DTX3Q8N9I9 DUX4L9-201ENST00000449051 1259 ntBASIC19.34■□□□□ 0.69
DTX3Q8N9I9 DUX4L18-201ENST00000553347 1267 ntBASIC19.34■□□□□ 0.69
DTX3Q8N9I9 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC19.34■□□□□ 0.69
DTX3Q8N9I9 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
DTX3Q8N9I9 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
DTX3Q8N9I9 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.34■□□□□ 0.69
DTX3Q8N9I9 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
DTX3Q8N9I9 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
DTX3Q8N9I9 AC073130.3-201ENST00000624389 2278 ntBASIC19.34■□□□□ 0.69
DTX3Q8N9I9 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
DTX3Q8N9I9 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
DTX3Q8N9I9 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
DTX3Q8N9I9 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
DTX3Q8N9I9 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
DTX3Q8N9I9 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
DTX3Q8N9I9 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC19.33■□□□□ 0.68
DTX3Q8N9I9 MTX2-204ENST00000443241 799 ntTSL 3 BASIC19.33■□□□□ 0.68
DTX3Q8N9I9 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
DTX3Q8N9I9 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.33■□□□□ 0.68
DTX3Q8N9I9 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
DTX3Q8N9I9 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
DTX3Q8N9I9 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
DTX3Q8N9I9 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms