Protein–RNA interactions for Protein: Q8N7C3

TRIML2, Probable E3 ubiquitin-protein ligase TRIML2, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIML2Q8N7C3 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.18■□□□□ 0.98
TRIML2Q8N7C3 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
TRIML2Q8N7C3 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIML2Q8N7C3 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIML2Q8N7C3 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
TRIML2Q8N7C3 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.18■□□□□ 0.98
TRIML2Q8N7C3 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
TRIML2Q8N7C3 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIML2Q8N7C3 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIML2Q8N7C3 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TRIML2Q8N7C3 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIML2Q8N7C3 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TRIML2Q8N7C3 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIML2Q8N7C3 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIML2Q8N7C3 AC079630.1-202ENST00000618127 1840 ntBASIC21.18■□□□□ 0.98
TRIML2Q8N7C3 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.18■□□□□ 0.98
TRIML2Q8N7C3 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TRIML2Q8N7C3 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.17■□□□□ 0.98
TRIML2Q8N7C3 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIML2Q8N7C3 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIML2Q8N7C3 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.17■□□□□ 0.98
TRIML2Q8N7C3 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIML2Q8N7C3 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIML2Q8N7C3 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.17■□□□□ 0.98
TRIML2Q8N7C3 AL033527.3-201ENST00000566366 1196 ntBASIC21.17■□□□□ 0.98
TRIML2Q8N7C3 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
TRIML2Q8N7C3 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TRIML2Q8N7C3 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.17■□□□□ 0.98
TRIML2Q8N7C3 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIML2Q8N7C3 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
TRIML2Q8N7C3 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
TRIML2Q8N7C3 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.17■□□□□ 0.98
TRIML2Q8N7C3 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.17■□□□□ 0.98
TRIML2Q8N7C3 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIML2Q8N7C3 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIML2Q8N7C3 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRIML2Q8N7C3 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRIML2Q8N7C3 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRIML2Q8N7C3 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRIML2Q8N7C3 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TRIML2Q8N7C3 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRIML2Q8N7C3 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRIML2Q8N7C3 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.16■□□□□ 0.98
TRIML2Q8N7C3 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.16■□□□□ 0.98
TRIML2Q8N7C3 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
TRIML2Q8N7C3 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
TRIML2Q8N7C3 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.15■□□□□ 0.98
TRIML2Q8N7C3 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRIML2Q8N7C3 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRIML2Q8N7C3 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.15■□□□□ 0.98
TRIML2Q8N7C3 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRIML2Q8N7C3 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRIML2Q8N7C3 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRIML2Q8N7C3 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TRIML2Q8N7C3 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
TRIML2Q8N7C3 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRIML2Q8N7C3 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.15■□□□□ 0.98
TRIML2Q8N7C3 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.15■□□□□ 0.98
TRIML2Q8N7C3 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
TRIML2Q8N7C3 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.15■□□□□ 0.98
TRIML2Q8N7C3 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRIML2Q8N7C3 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRIML2Q8N7C3 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
TRIML2Q8N7C3 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
TRIML2Q8N7C3 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
TRIML2Q8N7C3 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
TRIML2Q8N7C3 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
TRIML2Q8N7C3 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
TRIML2Q8N7C3 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
TRIML2Q8N7C3 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC21.14■□□□□ 0.97
TRIML2Q8N7C3 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TRIML2Q8N7C3 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TRIML2Q8N7C3 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
TRIML2Q8N7C3 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TRIML2Q8N7C3 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.14■□□□□ 0.97
TRIML2Q8N7C3 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
TRIML2Q8N7C3 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.14■□□□□ 0.97
TRIML2Q8N7C3 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TRIML2Q8N7C3 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TRIML2Q8N7C3 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.14■□□□□ 0.97
TRIML2Q8N7C3 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
TRIML2Q8N7C3 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRIML2Q8N7C3 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.13■□□□□ 0.97
TRIML2Q8N7C3 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.13■□□□□ 0.97
TRIML2Q8N7C3 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TRIML2Q8N7C3 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRIML2Q8N7C3 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.13■□□□□ 0.97
TRIML2Q8N7C3 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
TRIML2Q8N7C3 AC103834.1-201ENST00000520383 144 ntBASIC21.13■□□□□ 0.97
TRIML2Q8N7C3 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRIML2Q8N7C3 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.13■□□□□ 0.97
TRIML2Q8N7C3 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TRIML2Q8N7C3 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TRIML2Q8N7C3 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRIML2Q8N7C3 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TRIML2Q8N7C3 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRIML2Q8N7C3 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRIML2Q8N7C3 KRT8P33-201ENST00000508125 1423 ntBASIC21.12■□□□□ 0.97
TRIML2Q8N7C3 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRIML2Q8N7C3 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms