Protein–RNA interactions for Protein: Q8N616

LINC00311, Putative uncharacterized protein encoded by LINC00311, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00311Q8N616 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LINC00311Q8N616 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LINC00311Q8N616 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
LINC00311Q8N616 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LINC00311Q8N616 AC087742.1-201ENST00000575880 1738 ntBASIC17.93■□□□□ 0.46
LINC00311Q8N616 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
LINC00311Q8N616 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LINC00311Q8N616 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC17.93■□□□□ 0.46
LINC00311Q8N616 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
LINC00311Q8N616 SF1-220ENST00000626028 704 ntTSL 2 BASIC17.93■□□□□ 0.46
LINC00311Q8N616 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LINC00311Q8N616 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LINC00311Q8N616 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
LINC00311Q8N616 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LINC00311Q8N616 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LINC00311Q8N616 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LINC00311Q8N616 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC17.93■□□□□ 0.46
LINC00311Q8N616 LINC01960-201ENST00000563759 1884 ntBASIC17.92■□□□□ 0.46
LINC00311Q8N616 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC17.92■□□□□ 0.46
LINC00311Q8N616 SYT6-210ENST00000641643 1587 ntBASIC17.92■□□□□ 0.46
LINC00311Q8N616 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
LINC00311Q8N616 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
LINC00311Q8N616 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
LINC00311Q8N616 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
LINC00311Q8N616 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LINC00311Q8N616 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC17.92■□□□□ 0.46
LINC00311Q8N616 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LINC00311Q8N616 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
LINC00311Q8N616 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LINC00311Q8N616 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
LINC00311Q8N616 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
LINC00311Q8N616 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LINC00311Q8N616 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LINC00311Q8N616 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
LINC00311Q8N616 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LINC00311Q8N616 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
LINC00311Q8N616 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
LINC00311Q8N616 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
LINC00311Q8N616 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC17.91■□□□□ 0.46
LINC00311Q8N616 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC17.91■□□□□ 0.46
LINC00311Q8N616 AC131212.1-201ENST00000613771 668 ntBASIC17.91■□□□□ 0.46
LINC00311Q8N616 AL117328.2-201ENST00000624617 1940 ntBASIC17.91■□□□□ 0.46
LINC00311Q8N616 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
LINC00311Q8N616 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LINC00311Q8N616 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
LINC00311Q8N616 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LINC00311Q8N616 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LINC00311Q8N616 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
LINC00311Q8N616 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LINC00311Q8N616 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
LINC00311Q8N616 PTCHD3P2-201ENST00000424937 1205 ntBASIC17.9■□□□□ 0.46
LINC00311Q8N616 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC17.9■□□□□ 0.46
LINC00311Q8N616 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
LINC00311Q8N616 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC17.9■□□□□ 0.46
LINC00311Q8N616 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LINC00311Q8N616 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LINC00311Q8N616 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LINC00311Q8N616 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
LINC00311Q8N616 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC17.89■□□□□ 0.45
LINC00311Q8N616 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
LINC00311Q8N616 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LINC00311Q8N616 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LINC00311Q8N616 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LINC00311Q8N616 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
LINC00311Q8N616 SERBP1P1-201ENST00000396021 1160 ntBASIC17.89■□□□□ 0.45
LINC00311Q8N616 AL136116.3-201ENST00000402907 1138 ntBASIC17.89■□□□□ 0.45
LINC00311Q8N616 HES6-206ENST00000409574 738 ntTSL 2 BASIC17.89■□□□□ 0.45
LINC00311Q8N616 OR2I1P-207ENST00000453522 948 ntBASIC17.89■□□□□ 0.45
LINC00311Q8N616 CA15P2-201ENST00000611168 834 ntBASIC17.89■□□□□ 0.45
LINC00311Q8N616 AC011298.3-201ENST00000615796 283 ntBASIC17.89■□□□□ 0.45
LINC00311Q8N616 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC17.89■□□□□ 0.45
LINC00311Q8N616 GUSBP5-202ENST00000510805 1989 ntBASIC17.89■□□□□ 0.45
LINC00311Q8N616 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
LINC00311Q8N616 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
LINC00311Q8N616 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
LINC00311Q8N616 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
LINC00311Q8N616 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LINC00311Q8N616 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC17.89■□□□□ 0.45
LINC00311Q8N616 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LINC00311Q8N616 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LINC00311Q8N616 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LINC00311Q8N616 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LINC00311Q8N616 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
LINC00311Q8N616 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC17.88■□□□□ 0.45
LINC00311Q8N616 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
LINC00311Q8N616 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC17.88■□□□□ 0.45
LINC00311Q8N616 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC17.88■□□□□ 0.45
LINC00311Q8N616 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LINC00311Q8N616 AL031602.1-201ENST00000633169 911 ntBASIC17.88■□□□□ 0.45
LINC00311Q8N616 ECEL1P1-201ENST00000373592 1742 ntBASIC17.88■□□□□ 0.45
LINC00311Q8N616 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC17.88■□□□□ 0.45
LINC00311Q8N616 AC242852.2-201ENST00000615738 1807 ntBASIC17.88■□□□□ 0.45
LINC00311Q8N616 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC17.88■□□□□ 0.45
LINC00311Q8N616 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LINC00311Q8N616 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LINC00311Q8N616 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
LINC00311Q8N616 STX4-202ENST00000394998 1498 ntTSL 2 BASIC17.88■□□□□ 0.45
LINC00311Q8N616 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
LINC00311Q8N616 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LINC00311Q8N616 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms