Protein–RNA interactions for Protein: Q8N1F7

NUP93, Nuclear pore complex protein Nup93, humanhuman

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP93Q8N1F7 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
NUP93Q8N1F7 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC23.24■■□□□ 1.31
NUP93Q8N1F7 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC23.24■■□□□ 1.31
NUP93Q8N1F7 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
NUP93Q8N1F7 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
NUP93Q8N1F7 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
NUP93Q8N1F7 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
NUP93Q8N1F7 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC23.24■■□□□ 1.31
NUP93Q8N1F7 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
NUP93Q8N1F7 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
NUP93Q8N1F7 THRA-202ENST00000394121 2260 ntTSL 2 BASIC23.23■■□□□ 1.31
NUP93Q8N1F7 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
NUP93Q8N1F7 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
NUP93Q8N1F7 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC23.23■■□□□ 1.31
NUP93Q8N1F7 IGHV3-19-201ENST00000521488 291 ntBASIC23.23■■□□□ 1.31
NUP93Q8N1F7 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
NUP93Q8N1F7 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
NUP93Q8N1F7 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC23.23■■□□□ 1.31
NUP93Q8N1F7 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC23.22■■□□□ 1.31
NUP93Q8N1F7 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC23.22■■□□□ 1.31
NUP93Q8N1F7 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
NUP93Q8N1F7 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
NUP93Q8N1F7 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
NUP93Q8N1F7 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC23.22■■□□□ 1.31
NUP93Q8N1F7 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC23.22■■□□□ 1.31
NUP93Q8N1F7 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
NUP93Q8N1F7 AP005435.1-201ENST00000529293 1178 ntBASIC23.22■■□□□ 1.31
NUP93Q8N1F7 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC23.22■■□□□ 1.31
NUP93Q8N1F7 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC23.22■■□□□ 1.31
NUP93Q8N1F7 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
NUP93Q8N1F7 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC23.22■■□□□ 1.31
NUP93Q8N1F7 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
NUP93Q8N1F7 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC23.21■■□□□ 1.31
NUP93Q8N1F7 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
NUP93Q8N1F7 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC23.21■■□□□ 1.31
NUP93Q8N1F7 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
NUP93Q8N1F7 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
NUP93Q8N1F7 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC23.21■■□□□ 1.31
NUP93Q8N1F7 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
NUP93Q8N1F7 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
NUP93Q8N1F7 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
NUP93Q8N1F7 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
NUP93Q8N1F7 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC23.19■■□□□ 1.3
NUP93Q8N1F7 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
NUP93Q8N1F7 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
NUP93Q8N1F7 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
NUP93Q8N1F7 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
NUP93Q8N1F7 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC23.19■■□□□ 1.3
NUP93Q8N1F7 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
NUP93Q8N1F7 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
NUP93Q8N1F7 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
NUP93Q8N1F7 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
NUP93Q8N1F7 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
NUP93Q8N1F7 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC23.18■■□□□ 1.3
NUP93Q8N1F7 RARRES2P6-201ENST00000567333 442 ntBASIC23.18■■□□□ 1.3
NUP93Q8N1F7 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
NUP93Q8N1F7 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
NUP93Q8N1F7 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC23.18■■□□□ 1.3
NUP93Q8N1F7 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
NUP93Q8N1F7 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
NUP93Q8N1F7 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
NUP93Q8N1F7 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NUP93Q8N1F7 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
NUP93Q8N1F7 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC23.17■■□□□ 1.3
NUP93Q8N1F7 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NUP93Q8N1F7 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
NUP93Q8N1F7 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
NUP93Q8N1F7 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC23.17■■□□□ 1.3
NUP93Q8N1F7 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC23.17■■□□□ 1.3
NUP93Q8N1F7 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC23.17■■□□□ 1.3
NUP93Q8N1F7 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
NUP93Q8N1F7 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NUP93Q8N1F7 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NUP93Q8N1F7 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
NUP93Q8N1F7 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
NUP93Q8N1F7 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
NUP93Q8N1F7 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
NUP93Q8N1F7 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NUP93Q8N1F7 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NUP93Q8N1F7 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
NUP93Q8N1F7 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC23.16■■□□□ 1.3
NUP93Q8N1F7 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC23.16■■□□□ 1.3
NUP93Q8N1F7 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC23.16■■□□□ 1.3
NUP93Q8N1F7 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC23.16■■□□□ 1.3
NUP93Q8N1F7 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NUP93Q8N1F7 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NUP93Q8N1F7 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC23.16■■□□□ 1.3
NUP93Q8N1F7 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NUP93Q8N1F7 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC23.16■■□□□ 1.3
NUP93Q8N1F7 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC23.16■■□□□ 1.3
NUP93Q8N1F7 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
NUP93Q8N1F7 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
NUP93Q8N1F7 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
NUP93Q8N1F7 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NUP93Q8N1F7 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NUP93Q8N1F7 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NUP93Q8N1F7 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
NUP93Q8N1F7 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC23.15■■□□□ 1.3
NUP93Q8N1F7 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
NUP93Q8N1F7 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC23.15■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms