Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC33.28■■■□□ 2.92
ABCA6Q8N139 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC33.28■■■□□ 2.92
ABCA6Q8N139 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC33.28■■■□□ 2.92
ABCA6Q8N139 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
ABCA6Q8N139 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC33.28■■■□□ 2.92
ABCA6Q8N139 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC33.28■■■□□ 2.92
ABCA6Q8N139 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC33.28■■■□□ 2.92
ABCA6Q8N139 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC33.27■■■□□ 2.92
ABCA6Q8N139 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC33.27■■■□□ 2.92
ABCA6Q8N139 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC33.27■■■□□ 2.92
ABCA6Q8N139 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC33.27■■■□□ 2.92
ABCA6Q8N139 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC33.27■■■□□ 2.92
ABCA6Q8N139 KRT18P11-201ENST00000435214 1283 ntBASIC33.27■■■□□ 2.92
ABCA6Q8N139 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC33.27■■■□□ 2.92
ABCA6Q8N139 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC33.27■■■□□ 2.92
ABCA6Q8N139 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC33.27■■■□□ 2.92
ABCA6Q8N139 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC33.26■■■□□ 2.92
ABCA6Q8N139 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC33.26■■■□□ 2.92
ABCA6Q8N139 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC33.26■■■□□ 2.92
ABCA6Q8N139 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC33.26■■■□□ 2.91
ABCA6Q8N139 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC33.26■■■□□ 2.91
ABCA6Q8N139 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC33.26■■■□□ 2.91
ABCA6Q8N139 KRT18P6-201ENST00000555540 1265 ntBASIC33.26■■■□□ 2.91
ABCA6Q8N139 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC33.26■■■□□ 2.91
ABCA6Q8N139 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC33.25■■■□□ 2.91
ABCA6Q8N139 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC33.25■■■□□ 2.91
ABCA6Q8N139 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
ABCA6Q8N139 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
ABCA6Q8N139 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC33.25■■■□□ 2.91
ABCA6Q8N139 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
ABCA6Q8N139 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
ABCA6Q8N139 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC33.24■■■□□ 2.91
ABCA6Q8N139 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC33.24■■■□□ 2.91
ABCA6Q8N139 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC33.24■■■□□ 2.91
ABCA6Q8N139 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC33.24■■■□□ 2.91
ABCA6Q8N139 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC33.24■■■□□ 2.91
ABCA6Q8N139 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
ABCA6Q8N139 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC33.24■■■□□ 2.91
ABCA6Q8N139 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC33.24■■■□□ 2.91
ABCA6Q8N139 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC33.24■■■□□ 2.91
ABCA6Q8N139 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
ABCA6Q8N139 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC33.24■■■□□ 2.91
ABCA6Q8N139 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
ABCA6Q8N139 MAZ-216ENST00000616501 991 ntTSL 5 BASIC33.24■■■□□ 2.91
ABCA6Q8N139 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC33.23■■■□□ 2.91
ABCA6Q8N139 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
ABCA6Q8N139 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC33.23■■■□□ 2.91
ABCA6Q8N139 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC33.23■■■□□ 2.91
ABCA6Q8N139 METTL15-202ENST00000403099 795 ntTSL 5 BASIC33.23■■■□□ 2.91
ABCA6Q8N139 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC33.23■■■□□ 2.91
ABCA6Q8N139 AC098934.4-201ENST00000564127 592 ntBASIC33.23■■■□□ 2.91
ABCA6Q8N139 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC33.23■■■□□ 2.91
ABCA6Q8N139 SMUG1P1-201ENST00000590640 811 ntBASIC33.23■■■□□ 2.91
ABCA6Q8N139 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC33.23■■■□□ 2.91
ABCA6Q8N139 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC33.23■■■□□ 2.91
ABCA6Q8N139 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC33.22■■■□□ 2.91
ABCA6Q8N139 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC33.22■■■□□ 2.91
ABCA6Q8N139 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC33.22■■■□□ 2.91
ABCA6Q8N139 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC33.22■■■□□ 2.91
ABCA6Q8N139 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC33.22■■■□□ 2.91
ABCA6Q8N139 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
ABCA6Q8N139 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC33.22■■■□□ 2.91
ABCA6Q8N139 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC33.22■■■□□ 2.91
ABCA6Q8N139 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC33.22■■■□□ 2.91
ABCA6Q8N139 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
ABCA6Q8N139 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
ABCA6Q8N139 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC33.21■■■□□ 2.91
ABCA6Q8N139 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
ABCA6Q8N139 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC33.21■■■□□ 2.91
ABCA6Q8N139 EI24-213ENST00000618552 1747 ntTSL 5 BASIC33.21■■■□□ 2.91
ABCA6Q8N139 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC33.21■■■□□ 2.91
ABCA6Q8N139 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
ABCA6Q8N139 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC33.2■■■□□ 2.91
ABCA6Q8N139 CPT2-209ENST00000636935 803 ntTSL 5 BASIC33.2■■■□□ 2.91
ABCA6Q8N139 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC33.2■■■□□ 2.91
ABCA6Q8N139 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.9
ABCA6Q8N139 TSPY6P-201ENST00000448518 926 ntBASIC33.2■■■□□ 2.9
ABCA6Q8N139 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC33.2■■■□□ 2.9
ABCA6Q8N139 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.9
ABCA6Q8N139 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC33.19■■■□□ 2.9
ABCA6Q8N139 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC33.19■■■□□ 2.9
ABCA6Q8N139 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
ABCA6Q8N139 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC33.19■■■□□ 2.9
ABCA6Q8N139 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC33.18■■■□□ 2.9
ABCA6Q8N139 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
ABCA6Q8N139 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC33.18■■■□□ 2.9
ABCA6Q8N139 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
ABCA6Q8N139 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
ABCA6Q8N139 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC33.18■■■□□ 2.9
ABCA6Q8N139 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC33.18■■■□□ 2.9
ABCA6Q8N139 AL138781.1-201ENST00000566567 1274 ntBASIC33.17■■■□□ 2.9
ABCA6Q8N139 AL121832.2-201ENST00000610979 668 ntBASIC33.17■■■□□ 2.9
ABCA6Q8N139 LINC01529-204ENST00000636474 1715 ntBASIC33.17■■■□□ 2.9
ABCA6Q8N139 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
ABCA6Q8N139 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC33.17■■■□□ 2.9
ABCA6Q8N139 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC33.17■■■□□ 2.9
ABCA6Q8N139 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC33.16■■■□□ 2.9
ABCA6Q8N139 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC33.16■■■□□ 2.9
ABCA6Q8N139 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC33.16■■■□□ 2.9
ABCA6Q8N139 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC33.16■■■□□ 2.9
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms