Protein–RNA interactions for Protein: Q8IYT3

CCDC170, Coiled-coil domain-containing protein 170, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170Q8IYT3 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CCDC170Q8IYT3 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CCDC170Q8IYT3 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CCDC170Q8IYT3 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC23.69■■□□□ 1.38
CCDC170Q8IYT3 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC23.69■■□□□ 1.38
CCDC170Q8IYT3 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CCDC170Q8IYT3 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CCDC170Q8IYT3 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CCDC170Q8IYT3 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC23.69■■□□□ 1.38
CCDC170Q8IYT3 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC23.69■■□□□ 1.38
CCDC170Q8IYT3 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC23.69■■□□□ 1.38
CCDC170Q8IYT3 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CCDC170Q8IYT3 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
CCDC170Q8IYT3 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC23.68■■□□□ 1.38
CCDC170Q8IYT3 AL137060.1-201ENST00000618151 2648 ntBASIC23.68■■□□□ 1.38
CCDC170Q8IYT3 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CCDC170Q8IYT3 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC23.68■■□□□ 1.38
CCDC170Q8IYT3 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC23.68■■□□□ 1.38
CCDC170Q8IYT3 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC23.68■■□□□ 1.38
CCDC170Q8IYT3 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
CCDC170Q8IYT3 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC23.68■■□□□ 1.38
CCDC170Q8IYT3 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC23.68■■□□□ 1.38
CCDC170Q8IYT3 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC23.68■■□□□ 1.38
CCDC170Q8IYT3 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CCDC170Q8IYT3 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC23.67■■□□□ 1.38
CCDC170Q8IYT3 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CCDC170Q8IYT3 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC23.67■■□□□ 1.38
CCDC170Q8IYT3 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC23.67■■□□□ 1.38
CCDC170Q8IYT3 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CCDC170Q8IYT3 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
CCDC170Q8IYT3 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
CCDC170Q8IYT3 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
CCDC170Q8IYT3 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CCDC170Q8IYT3 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CCDC170Q8IYT3 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CCDC170Q8IYT3 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC23.66■■□□□ 1.38
CCDC170Q8IYT3 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CCDC170Q8IYT3 AC137630.3-201ENST00000607245 391 ntBASIC23.66■■□□□ 1.38
CCDC170Q8IYT3 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CCDC170Q8IYT3 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CCDC170Q8IYT3 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CCDC170Q8IYT3 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC23.66■■□□□ 1.38
CCDC170Q8IYT3 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CCDC170Q8IYT3 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC23.66■■□□□ 1.38
CCDC170Q8IYT3 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CCDC170Q8IYT3 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
CCDC170Q8IYT3 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CCDC170Q8IYT3 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CCDC170Q8IYT3 AC005703.6-201ENST00000623265 1329 ntBASIC23.65■■□□□ 1.38
CCDC170Q8IYT3 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC23.65■■□□□ 1.38
CCDC170Q8IYT3 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC23.65■■□□□ 1.38
CCDC170Q8IYT3 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
CCDC170Q8IYT3 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC23.65■■□□□ 1.38
CCDC170Q8IYT3 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
CCDC170Q8IYT3 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC23.64■■□□□ 1.38
CCDC170Q8IYT3 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.38
CCDC170Q8IYT3 LINC01960-201ENST00000563759 1884 ntBASIC23.64■■□□□ 1.38
CCDC170Q8IYT3 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC23.64■■□□□ 1.38
CCDC170Q8IYT3 SENP5-202ENST00000419026 973 ntTSL 3 BASIC23.64■■□□□ 1.37
CCDC170Q8IYT3 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC23.64■■□□□ 1.37
CCDC170Q8IYT3 MIR6722-201ENST00000617286 78 ntBASIC23.64■■□□□ 1.37
CCDC170Q8IYT3 AC009086.3-201ENST00000623486 1008 ntBASIC23.64■■□□□ 1.37
CCDC170Q8IYT3 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC23.64■■□□□ 1.37
CCDC170Q8IYT3 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
CCDC170Q8IYT3 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CCDC170Q8IYT3 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC23.64■■□□□ 1.37
CCDC170Q8IYT3 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC23.64■■□□□ 1.37
CCDC170Q8IYT3 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC23.64■■□□□ 1.37
CCDC170Q8IYT3 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
CCDC170Q8IYT3 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
CCDC170Q8IYT3 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CCDC170Q8IYT3 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CCDC170Q8IYT3 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CCDC170Q8IYT3 GUK1-208ENST00000366728 842 ntTSL 2 BASIC23.63■■□□□ 1.37
CCDC170Q8IYT3 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
CCDC170Q8IYT3 AC103834.1-201ENST00000520383 144 ntBASIC23.63■■□□□ 1.37
CCDC170Q8IYT3 DUX4L4-201ENST00000566884 1269 ntBASIC23.63■■□□□ 1.37
CCDC170Q8IYT3 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC23.63■■□□□ 1.37
CCDC170Q8IYT3 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
CCDC170Q8IYT3 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CCDC170Q8IYT3 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CCDC170Q8IYT3 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC23.63■■□□□ 1.37
CCDC170Q8IYT3 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CCDC170Q8IYT3 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC23.62■■□□□ 1.37
CCDC170Q8IYT3 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CCDC170Q8IYT3 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
CCDC170Q8IYT3 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CCDC170Q8IYT3 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CCDC170Q8IYT3 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
CCDC170Q8IYT3 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC23.62■■□□□ 1.37
CCDC170Q8IYT3 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CCDC170Q8IYT3 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC23.62■■□□□ 1.37
CCDC170Q8IYT3 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
CCDC170Q8IYT3 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CCDC170Q8IYT3 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CCDC170Q8IYT3 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CCDC170Q8IYT3 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC23.61■■□□□ 1.37
CCDC170Q8IYT3 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CCDC170Q8IYT3 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC23.61■■□□□ 1.37
CCDC170Q8IYT3 ASB1-202ENST00000409297 878 ntTSL 5 BASIC23.61■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms