Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
C9orf40Q8IXQ3 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.44■□□□□ 0.86
C9orf40Q8IXQ3 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
C9orf40Q8IXQ3 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.44■□□□□ 0.86
C9orf40Q8IXQ3 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
C9orf40Q8IXQ3 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.43■□□□□ 0.86
C9orf40Q8IXQ3 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
C9orf40Q8IXQ3 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
C9orf40Q8IXQ3 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
C9orf40Q8IXQ3 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.43■□□□□ 0.86
C9orf40Q8IXQ3 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.43■□□□□ 0.86
C9orf40Q8IXQ3 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
C9orf40Q8IXQ3 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
C9orf40Q8IXQ3 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
C9orf40Q8IXQ3 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
C9orf40Q8IXQ3 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.42■□□□□ 0.86
C9orf40Q8IXQ3 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.42■□□□□ 0.86
C9orf40Q8IXQ3 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
C9orf40Q8IXQ3 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.42■□□□□ 0.86
C9orf40Q8IXQ3 CA15P2-201ENST00000611168 834 ntBASIC20.42■□□□□ 0.86
C9orf40Q8IXQ3 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
C9orf40Q8IXQ3 RASA4CP-201ENST00000424092 1398 ntBASIC20.42■□□□□ 0.86
C9orf40Q8IXQ3 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
C9orf40Q8IXQ3 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
C9orf40Q8IXQ3 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
C9orf40Q8IXQ3 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
C9orf40Q8IXQ3 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.41■□□□□ 0.86
C9orf40Q8IXQ3 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
C9orf40Q8IXQ3 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
C9orf40Q8IXQ3 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
C9orf40Q8IXQ3 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
C9orf40Q8IXQ3 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
C9orf40Q8IXQ3 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
C9orf40Q8IXQ3 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.41■□□□□ 0.86
C9orf40Q8IXQ3 AC019069.1-201ENST00000610008 1333 ntBASIC20.41■□□□□ 0.86
C9orf40Q8IXQ3 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
C9orf40Q8IXQ3 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
C9orf40Q8IXQ3 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.41■□□□□ 0.86
C9orf40Q8IXQ3 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
C9orf40Q8IXQ3 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
C9orf40Q8IXQ3 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
C9orf40Q8IXQ3 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
C9orf40Q8IXQ3 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
C9orf40Q8IXQ3 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
C9orf40Q8IXQ3 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
C9orf40Q8IXQ3 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
C9orf40Q8IXQ3 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.4■□□□□ 0.86
C9orf40Q8IXQ3 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.4■□□□□ 0.86
C9orf40Q8IXQ3 C9orf163-202ENST00000624034 2573 ntBASIC20.4■□□□□ 0.86
C9orf40Q8IXQ3 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
C9orf40Q8IXQ3 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.39■□□□□ 0.86
C9orf40Q8IXQ3 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
C9orf40Q8IXQ3 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
C9orf40Q8IXQ3 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
C9orf40Q8IXQ3 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.39■□□□□ 0.85
C9orf40Q8IXQ3 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
C9orf40Q8IXQ3 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.39■□□□□ 0.85
C9orf40Q8IXQ3 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.39■□□□□ 0.85
C9orf40Q8IXQ3 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
C9orf40Q8IXQ3 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.39■□□□□ 0.85
C9orf40Q8IXQ3 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.39■□□□□ 0.85
C9orf40Q8IXQ3 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.38■□□□□ 0.85
C9orf40Q8IXQ3 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.38■□□□□ 0.85
C9orf40Q8IXQ3 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.38■□□□□ 0.85
C9orf40Q8IXQ3 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
C9orf40Q8IXQ3 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
C9orf40Q8IXQ3 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.38■□□□□ 0.85
C9orf40Q8IXQ3 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.38■□□□□ 0.85
C9orf40Q8IXQ3 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
C9orf40Q8IXQ3 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
C9orf40Q8IXQ3 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.38■□□□□ 0.85
C9orf40Q8IXQ3 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
C9orf40Q8IXQ3 AC126544.1-201ENST00000580842 1059 ntBASIC20.38■□□□□ 0.85
C9orf40Q8IXQ3 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
C9orf40Q8IXQ3 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
C9orf40Q8IXQ3 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.38■□□□□ 0.85
C9orf40Q8IXQ3 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.38■□□□□ 0.85
C9orf40Q8IXQ3 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
C9orf40Q8IXQ3 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
C9orf40Q8IXQ3 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.38■□□□□ 0.85
C9orf40Q8IXQ3 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.37■□□□□ 0.85
C9orf40Q8IXQ3 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.37■□□□□ 0.85
C9orf40Q8IXQ3 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.37■□□□□ 0.85
C9orf40Q8IXQ3 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
C9orf40Q8IXQ3 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.37■□□□□ 0.85
C9orf40Q8IXQ3 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
C9orf40Q8IXQ3 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
C9orf40Q8IXQ3 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.37■□□□□ 0.85
C9orf40Q8IXQ3 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
C9orf40Q8IXQ3 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.37■□□□□ 0.85
C9orf40Q8IXQ3 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.37■□□□□ 0.85
C9orf40Q8IXQ3 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.37■□□□□ 0.85
C9orf40Q8IXQ3 AL031602.1-201ENST00000633169 911 ntBASIC20.37■□□□□ 0.85
C9orf40Q8IXQ3 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
C9orf40Q8IXQ3 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
C9orf40Q8IXQ3 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
C9orf40Q8IXQ3 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
C9orf40Q8IXQ3 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
C9orf40Q8IXQ3 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.37■□□□□ 0.85
C9orf40Q8IXQ3 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms