Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
CRLF3Q8IUI8 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
CRLF3Q8IUI8 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CRLF3Q8IUI8 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CRLF3Q8IUI8 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CRLF3Q8IUI8 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CRLF3Q8IUI8 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
CRLF3Q8IUI8 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.96■■□□□ 1.11
CRLF3Q8IUI8 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CRLF3Q8IUI8 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
CRLF3Q8IUI8 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CRLF3Q8IUI8 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CRLF3Q8IUI8 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
CRLF3Q8IUI8 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
CRLF3Q8IUI8 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
CRLF3Q8IUI8 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
CRLF3Q8IUI8 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
CRLF3Q8IUI8 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
CRLF3Q8IUI8 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CRLF3Q8IUI8 KRT18P24-201ENST00000344739 1156 ntBASIC21.95■■□□□ 1.1
CRLF3Q8IUI8 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CRLF3Q8IUI8 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CRLF3Q8IUI8 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.95■■□□□ 1.1
CRLF3Q8IUI8 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
CRLF3Q8IUI8 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.95■■□□□ 1.1
CRLF3Q8IUI8 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CRLF3Q8IUI8 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CRLF3Q8IUI8 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CRLF3Q8IUI8 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CRLF3Q8IUI8 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CRLF3Q8IUI8 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
CRLF3Q8IUI8 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CRLF3Q8IUI8 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.94■■□□□ 1.1
CRLF3Q8IUI8 THA1P-201ENST00000590384 1145 ntBASIC21.94■■□□□ 1.1
CRLF3Q8IUI8 AL024507.2-201ENST00000606070 2574 ntBASIC21.94■■□□□ 1.1
CRLF3Q8IUI8 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CRLF3Q8IUI8 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.94■■□□□ 1.1
CRLF3Q8IUI8 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CRLF3Q8IUI8 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CRLF3Q8IUI8 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CRLF3Q8IUI8 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CRLF3Q8IUI8 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CRLF3Q8IUI8 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CRLF3Q8IUI8 GUSBP5-201ENST00000418136 578 ntBASIC21.93■■□□□ 1.1
CRLF3Q8IUI8 AC239859.2-201ENST00000444165 318 ntBASIC21.93■■□□□ 1.1
CRLF3Q8IUI8 AC120024.1-201ENST00000562672 995 ntBASIC21.93■■□□□ 1.1
CRLF3Q8IUI8 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.93■■□□□ 1.1
CRLF3Q8IUI8 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
CRLF3Q8IUI8 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CRLF3Q8IUI8 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.92■■□□□ 1.1
CRLF3Q8IUI8 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CRLF3Q8IUI8 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CRLF3Q8IUI8 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CRLF3Q8IUI8 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CRLF3Q8IUI8 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CRLF3Q8IUI8 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.92■■□□□ 1.1
CRLF3Q8IUI8 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.92■■□□□ 1.1
CRLF3Q8IUI8 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CRLF3Q8IUI8 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CRLF3Q8IUI8 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CRLF3Q8IUI8 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.92■■□□□ 1.1
CRLF3Q8IUI8 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CRLF3Q8IUI8 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.91■■□□□ 1.1
CRLF3Q8IUI8 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
CRLF3Q8IUI8 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CRLF3Q8IUI8 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.91■■□□□ 1.1
CRLF3Q8IUI8 AL353803.4-201ENST00000565882 1934 ntBASIC21.91■■□□□ 1.1
CRLF3Q8IUI8 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.91■■□□□ 1.1
CRLF3Q8IUI8 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CRLF3Q8IUI8 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
CRLF3Q8IUI8 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
CRLF3Q8IUI8 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.9■■□□□ 1.1
CRLF3Q8IUI8 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CRLF3Q8IUI8 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CRLF3Q8IUI8 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CRLF3Q8IUI8 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
CRLF3Q8IUI8 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.9■■□□□ 1.1
CRLF3Q8IUI8 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.9■■□□□ 1.1
CRLF3Q8IUI8 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
CRLF3Q8IUI8 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
CRLF3Q8IUI8 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CRLF3Q8IUI8 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CRLF3Q8IUI8 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.9■■□□□ 1.1
CRLF3Q8IUI8 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CRLF3Q8IUI8 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
CRLF3Q8IUI8 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.89■■□□□ 1.1
CRLF3Q8IUI8 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CRLF3Q8IUI8 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.89■■□□□ 1.09
CRLF3Q8IUI8 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.89■■□□□ 1.09
CRLF3Q8IUI8 Z92544.1-202ENST00000571933 1220 ntBASIC21.89■■□□□ 1.09
CRLF3Q8IUI8 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.09
CRLF3Q8IUI8 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.89■■□□□ 1.09
CRLF3Q8IUI8 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
CRLF3Q8IUI8 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CRLF3Q8IUI8 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CRLF3Q8IUI8 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CRLF3Q8IUI8 FBXW4P1-201ENST00000426721 2239 ntBASIC21.88■■□□□ 1.09
CRLF3Q8IUI8 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
CRLF3Q8IUI8 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.88■■□□□ 1.09
CRLF3Q8IUI8 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms