Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
MRPL55Q7Z7F7 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
MRPL55Q7Z7F7 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC14.11□□□□□ -0.15
MRPL55Q7Z7F7 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
MRPL55Q7Z7F7 GUSBP5-202ENST00000510805 1989 ntBASIC14.11□□□□□ -0.15
MRPL55Q7Z7F7 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
MRPL55Q7Z7F7 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
MRPL55Q7Z7F7 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
MRPL55Q7Z7F7 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
MRPL55Q7Z7F7 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
MRPL55Q7Z7F7 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC14.11□□□□□ -0.15
MRPL55Q7Z7F7 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
MRPL55Q7Z7F7 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC14.11□□□□□ -0.15
MRPL55Q7Z7F7 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
MRPL55Q7Z7F7 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC14.11□□□□□ -0.15
MRPL55Q7Z7F7 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
MRPL55Q7Z7F7 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC14.11□□□□□ -0.15
MRPL55Q7Z7F7 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
MRPL55Q7Z7F7 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
MRPL55Q7Z7F7 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
MRPL55Q7Z7F7 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
MRPL55Q7Z7F7 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
MRPL55Q7Z7F7 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
MRPL55Q7Z7F7 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
MRPL55Q7Z7F7 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
MRPL55Q7Z7F7 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
MRPL55Q7Z7F7 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
MRPL55Q7Z7F7 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC14.1□□□□□ -0.15
MRPL55Q7Z7F7 Z92544.1-202ENST00000571933 1220 ntBASIC14.1□□□□□ -0.15
MRPL55Q7Z7F7 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC14.1□□□□□ -0.15
MRPL55Q7Z7F7 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC14.1□□□□□ -0.15
MRPL55Q7Z7F7 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
MRPL55Q7Z7F7 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
MRPL55Q7Z7F7 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
MRPL55Q7Z7F7 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC14.1□□□□□ -0.15
MRPL55Q7Z7F7 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
MRPL55Q7Z7F7 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
MRPL55Q7Z7F7 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
MRPL55Q7Z7F7 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
MRPL55Q7Z7F7 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
MRPL55Q7Z7F7 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC14.09□□□□□ -0.15
MRPL55Q7Z7F7 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC14.09□□□□□ -0.15
MRPL55Q7Z7F7 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
MRPL55Q7Z7F7 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC14.09□□□□□ -0.15
MRPL55Q7Z7F7 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC14.09□□□□□ -0.15
MRPL55Q7Z7F7 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MRPL55Q7Z7F7 MTDHP2-201ENST00000601468 714 ntBASIC14.09□□□□□ -0.15
MRPL55Q7Z7F7 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MRPL55Q7Z7F7 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC14.09□□□□□ -0.15
MRPL55Q7Z7F7 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC14.09□□□□□ -0.15
MRPL55Q7Z7F7 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
MRPL55Q7Z7F7 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MRPL55Q7Z7F7 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
MRPL55Q7Z7F7 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC14.09□□□□□ -0.15
MRPL55Q7Z7F7 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC14.09□□□□□ -0.15
MRPL55Q7Z7F7 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MRPL55Q7Z7F7 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MRPL55Q7Z7F7 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MRPL55Q7Z7F7 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MRPL55Q7Z7F7 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MRPL55Q7Z7F7 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
MRPL55Q7Z7F7 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
MRPL55Q7Z7F7 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.15
MRPL55Q7Z7F7 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
MRPL55Q7Z7F7 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
MRPL55Q7Z7F7 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
MRPL55Q7Z7F7 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
MRPL55Q7Z7F7 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
MRPL55Q7Z7F7 LINC01529-204ENST00000636474 1715 ntBASIC14.08□□□□□ -0.16
MRPL55Q7Z7F7 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
MRPL55Q7Z7F7 AC092028.1-203ENST00000608262 953 ntBASIC14.08□□□□□ -0.16
MRPL55Q7Z7F7 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
MRPL55Q7Z7F7 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
MRPL55Q7Z7F7 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC14.08□□□□□ -0.16
MRPL55Q7Z7F7 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
MRPL55Q7Z7F7 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
MRPL55Q7Z7F7 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
MRPL55Q7Z7F7 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
MRPL55Q7Z7F7 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
MRPL55Q7Z7F7 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC14.07□□□□□ -0.16
MRPL55Q7Z7F7 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
MRPL55Q7Z7F7 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
MRPL55Q7Z7F7 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
MRPL55Q7Z7F7 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC14.07□□□□□ -0.16
MRPL55Q7Z7F7 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
MRPL55Q7Z7F7 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
MRPL55Q7Z7F7 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
MRPL55Q7Z7F7 TERT-206ENST00000508104 2486 ntTSL 5 BASIC14.07□□□□□ -0.16
MRPL55Q7Z7F7 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
MRPL55Q7Z7F7 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
MRPL55Q7Z7F7 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
MRPL55Q7Z7F7 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
MRPL55Q7Z7F7 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
MRPL55Q7Z7F7 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
MRPL55Q7Z7F7 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
MRPL55Q7Z7F7 FP325331.1-202ENST00000623531 1380 ntBASIC14.07□□□□□ -0.16
MRPL55Q7Z7F7 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
MRPL55Q7Z7F7 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
MRPL55Q7Z7F7 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC14.06□□□□□ -0.16
MRPL55Q7Z7F7 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms