Protein–RNA interactions for Protein: Q7L5N1

COPS6, COP9 signalosome complex subunit 6, humanhuman

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6Q7L5N1 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.08
COPS6Q7L5N1 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
COPS6Q7L5N1 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
COPS6Q7L5N1 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC28.07■■■□□ 2.08
COPS6Q7L5N1 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC28.07■■■□□ 2.08
COPS6Q7L5N1 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
COPS6Q7L5N1 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC28.07■■■□□ 2.08
COPS6Q7L5N1 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC28.06■■■□□ 2.08
COPS6Q7L5N1 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC28.06■■■□□ 2.08
COPS6Q7L5N1 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC28.06■■■□□ 2.08
COPS6Q7L5N1 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC28.06■■■□□ 2.08
COPS6Q7L5N1 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC28.06■■■□□ 2.08
COPS6Q7L5N1 GLI3-203ENST00000437480 451 ntTSL 2 BASIC28.06■■■□□ 2.08
COPS6Q7L5N1 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC28.06■■■□□ 2.08
COPS6Q7L5N1 AC105233.4-201ENST00000642045 216 ntBASIC28.06■■■□□ 2.08
COPS6Q7L5N1 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
COPS6Q7L5N1 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC28.06■■■□□ 2.08
COPS6Q7L5N1 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC28.06■■■□□ 2.08
COPS6Q7L5N1 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC28.06■■■□□ 2.08
COPS6Q7L5N1 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
COPS6Q7L5N1 RARA-203ENST00000394086 2008 ntTSL 2 BASIC28.06■■■□□ 2.08
COPS6Q7L5N1 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC28.05■■■□□ 2.08
COPS6Q7L5N1 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC28.05■■■□□ 2.08
COPS6Q7L5N1 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
COPS6Q7L5N1 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC28.05■■■□□ 2.08
COPS6Q7L5N1 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC28.05■■■□□ 2.08
COPS6Q7L5N1 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC28.05■■■□□ 2.08
COPS6Q7L5N1 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
COPS6Q7L5N1 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC28.04■■■□□ 2.08
COPS6Q7L5N1 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
COPS6Q7L5N1 EI24-211ENST00000534546 1544 ntTSL 2 BASIC28.04■■■□□ 2.08
COPS6Q7L5N1 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC28.04■■■□□ 2.08
COPS6Q7L5N1 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC28.04■■■□□ 2.08
COPS6Q7L5N1 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
COPS6Q7L5N1 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
COPS6Q7L5N1 KRT18P5-201ENST00000436075 1291 ntBASIC28.04■■■□□ 2.08
COPS6Q7L5N1 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
COPS6Q7L5N1 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
COPS6Q7L5N1 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC28.04■■■□□ 2.08
COPS6Q7L5N1 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
COPS6Q7L5N1 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC28.04■■■□□ 2.08
COPS6Q7L5N1 CCDC92B-201ENST00000575506 885 ntBASIC28.04■■■□□ 2.08
COPS6Q7L5N1 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC28.04■■■□□ 2.08
COPS6Q7L5N1 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
COPS6Q7L5N1 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
COPS6Q7L5N1 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC28.03■■■□□ 2.08
COPS6Q7L5N1 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC28.03■■■□□ 2.08
COPS6Q7L5N1 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC28.03■■■□□ 2.08
COPS6Q7L5N1 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC28.03■■■□□ 2.08
COPS6Q7L5N1 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
COPS6Q7L5N1 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC28.03■■■□□ 2.08
COPS6Q7L5N1 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC28.03■■■□□ 2.08
COPS6Q7L5N1 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC28.03■■■□□ 2.08
COPS6Q7L5N1 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
COPS6Q7L5N1 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC28.03■■■□□ 2.08
COPS6Q7L5N1 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
COPS6Q7L5N1 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
COPS6Q7L5N1 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC28.02■■■□□ 2.08
COPS6Q7L5N1 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
COPS6Q7L5N1 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC28.02■■■□□ 2.08
COPS6Q7L5N1 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
COPS6Q7L5N1 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC28.02■■■□□ 2.08
COPS6Q7L5N1 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC28.02■■■□□ 2.08
COPS6Q7L5N1 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC28.02■■■□□ 2.08
COPS6Q7L5N1 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC28.02■■■□□ 2.08
COPS6Q7L5N1 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
COPS6Q7L5N1 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
COPS6Q7L5N1 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
COPS6Q7L5N1 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC28.02■■■□□ 2.08
COPS6Q7L5N1 ANOS2P-203ENST00000472227 1816 ntBASIC28.02■■■□□ 2.08
COPS6Q7L5N1 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC28.01■■■□□ 2.08
COPS6Q7L5N1 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC28.01■■■□□ 2.08
COPS6Q7L5N1 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC28.01■■■□□ 2.07
COPS6Q7L5N1 NT5C3AP1-201ENST00000394500 1012 ntBASIC28.01■■■□□ 2.07
COPS6Q7L5N1 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
COPS6Q7L5N1 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC28.01■■■□□ 2.07
COPS6Q7L5N1 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC28.01■■■□□ 2.07
COPS6Q7L5N1 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC28.01■■■□□ 2.07
COPS6Q7L5N1 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC28■■■□□ 2.07
COPS6Q7L5N1 MPST-204ENST00000404393 1329 ntTSL 5 BASIC28■■■□□ 2.07
COPS6Q7L5N1 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC28■■■□□ 2.07
COPS6Q7L5N1 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
COPS6Q7L5N1 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC28■■■□□ 2.07
COPS6Q7L5N1 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC28■■■□□ 2.07
COPS6Q7L5N1 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC28■■■□□ 2.07
COPS6Q7L5N1 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC28■■■□□ 2.07
COPS6Q7L5N1 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC28■■■□□ 2.07
COPS6Q7L5N1 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
COPS6Q7L5N1 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
COPS6Q7L5N1 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC27.99■■■□□ 2.07
COPS6Q7L5N1 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
COPS6Q7L5N1 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC27.99■■■□□ 2.07
COPS6Q7L5N1 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
COPS6Q7L5N1 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC27.99■■■□□ 2.07
COPS6Q7L5N1 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC27.99■■■□□ 2.07
COPS6Q7L5N1 TERF1P2-201ENST00000583350 1212 ntBASIC27.99■■■□□ 2.07
COPS6Q7L5N1 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
COPS6Q7L5N1 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC27.99■■■□□ 2.07
COPS6Q7L5N1 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC27.99■■■□□ 2.07
COPS6Q7L5N1 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC27.98■■■□□ 2.07
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms