Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.22■□□□□ 0.83
TUBA1AQ71U36 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TUBA1AQ71U36 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
TUBA1AQ71U36 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TUBA1AQ71U36 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
TUBA1AQ71U36 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TUBA1AQ71U36 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TUBA1AQ71U36 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TUBA1AQ71U36 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TUBA1AQ71U36 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.21■□□□□ 0.83
TUBA1AQ71U36 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.21■□□□□ 0.83
TUBA1AQ71U36 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TUBA1AQ71U36 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TUBA1AQ71U36 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TUBA1AQ71U36 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TUBA1AQ71U36 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TUBA1AQ71U36 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.21■□□□□ 0.83
TUBA1AQ71U36 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TUBA1AQ71U36 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.21■□□□□ 0.83
TUBA1AQ71U36 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TUBA1AQ71U36 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TUBA1AQ71U36 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.21■□□□□ 0.83
TUBA1AQ71U36 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.21■□□□□ 0.83
TUBA1AQ71U36 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
TUBA1AQ71U36 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
TUBA1AQ71U36 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TUBA1AQ71U36 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TUBA1AQ71U36 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.2■□□□□ 0.82
TUBA1AQ71U36 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TUBA1AQ71U36 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.2■□□□□ 0.82
TUBA1AQ71U36 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
TUBA1AQ71U36 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TUBA1AQ71U36 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TUBA1AQ71U36 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TUBA1AQ71U36 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TUBA1AQ71U36 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
TUBA1AQ71U36 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.2■□□□□ 0.82
TUBA1AQ71U36 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.2■□□□□ 0.82
TUBA1AQ71U36 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TUBA1AQ71U36 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.19■□□□□ 0.82
TUBA1AQ71U36 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
TUBA1AQ71U36 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TUBA1AQ71U36 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
TUBA1AQ71U36 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TUBA1AQ71U36 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TUBA1AQ71U36 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
TUBA1AQ71U36 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.19■□□□□ 0.82
TUBA1AQ71U36 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.19■□□□□ 0.82
TUBA1AQ71U36 AC092028.1-203ENST00000608262 953 ntBASIC20.19■□□□□ 0.82
TUBA1AQ71U36 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TUBA1AQ71U36 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
TUBA1AQ71U36 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TUBA1AQ71U36 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TUBA1AQ71U36 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
TUBA1AQ71U36 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TUBA1AQ71U36 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.18■□□□□ 0.82
TUBA1AQ71U36 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
TUBA1AQ71U36 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
TUBA1AQ71U36 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TUBA1AQ71U36 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
TUBA1AQ71U36 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.18■□□□□ 0.82
TUBA1AQ71U36 UNC93B8-201ENST00000511903 705 ntBASIC20.18■□□□□ 0.82
TUBA1AQ71U36 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
TUBA1AQ71U36 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TUBA1AQ71U36 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
TUBA1AQ71U36 C11orf96-202ENST00000528572 1834 ntBASIC20.18■□□□□ 0.82
TUBA1AQ71U36 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
TUBA1AQ71U36 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TUBA1AQ71U36 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
TUBA1AQ71U36 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.17■□□□□ 0.82
TUBA1AQ71U36 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TUBA1AQ71U36 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TUBA1AQ71U36 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TUBA1AQ71U36 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
TUBA1AQ71U36 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TUBA1AQ71U36 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TUBA1AQ71U36 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.17■□□□□ 0.82
TUBA1AQ71U36 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.17■□□□□ 0.82
TUBA1AQ71U36 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.17■□□□□ 0.82
TUBA1AQ71U36 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
TUBA1AQ71U36 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
TUBA1AQ71U36 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.17■□□□□ 0.82
TUBA1AQ71U36 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TUBA1AQ71U36 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TUBA1AQ71U36 AC131274.2-201ENST00000580697 1507 ntBASIC20.17■□□□□ 0.82
TUBA1AQ71U36 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TUBA1AQ71U36 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TUBA1AQ71U36 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TUBA1AQ71U36 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
TUBA1AQ71U36 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
TUBA1AQ71U36 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TUBA1AQ71U36 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TUBA1AQ71U36 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TUBA1AQ71U36 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.16■□□□□ 0.82
TUBA1AQ71U36 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.16■□□□□ 0.82
TUBA1AQ71U36 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.16■□□□□ 0.82
TUBA1AQ71U36 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.16■□□□□ 0.82
TUBA1AQ71U36 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TUBA1AQ71U36 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.16■□□□□ 0.82
TUBA1AQ71U36 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms