Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.38■■□□□ 1.01
RNF111Q6ZNA4 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RNF111Q6ZNA4 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RNF111Q6ZNA4 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RNF111Q6ZNA4 MTDHP2-201ENST00000601468 714 ntBASIC21.38■■□□□ 1.01
RNF111Q6ZNA4 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
RNF111Q6ZNA4 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RNF111Q6ZNA4 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RNF111Q6ZNA4 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
RNF111Q6ZNA4 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
RNF111Q6ZNA4 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RNF111Q6ZNA4 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RNF111Q6ZNA4 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RNF111Q6ZNA4 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
RNF111Q6ZNA4 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RNF111Q6ZNA4 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.37■■□□□ 1.01
RNF111Q6ZNA4 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RNF111Q6ZNA4 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.37■■□□□ 1.01
RNF111Q6ZNA4 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.37■■□□□ 1.01
RNF111Q6ZNA4 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
RNF111Q6ZNA4 ESRRAP2-201ENST00000418437 1549 ntBASIC21.37■■□□□ 1.01
RNF111Q6ZNA4 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.37■■□□□ 1.01
RNF111Q6ZNA4 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
RNF111Q6ZNA4 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RNF111Q6ZNA4 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RNF111Q6ZNA4 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.36■■□□□ 1.01
RNF111Q6ZNA4 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
RNF111Q6ZNA4 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.36■■□□□ 1.01
RNF111Q6ZNA4 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RNF111Q6ZNA4 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.36■■□□□ 1.01
RNF111Q6ZNA4 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.36■■□□□ 1.01
RNF111Q6ZNA4 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RNF111Q6ZNA4 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.36■■□□□ 1.01
RNF111Q6ZNA4 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RNF111Q6ZNA4 C11orf96-202ENST00000528572 1834 ntBASIC21.36■■□□□ 1.01
RNF111Q6ZNA4 AC026310.3-201ENST00000625186 2373 ntBASIC21.36■■□□□ 1.01
RNF111Q6ZNA4 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RNF111Q6ZNA4 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RNF111Q6ZNA4 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RNF111Q6ZNA4 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RNF111Q6ZNA4 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RNF111Q6ZNA4 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
RNF111Q6ZNA4 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.35■■□□□ 1.01
RNF111Q6ZNA4 UNC93B8-201ENST00000511903 705 ntBASIC21.35■■□□□ 1.01
RNF111Q6ZNA4 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.35■■□□□ 1.01
RNF111Q6ZNA4 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
RNF111Q6ZNA4 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.35■■□□□ 1.01
RNF111Q6ZNA4 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RNF111Q6ZNA4 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RNF111Q6ZNA4 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
RNF111Q6ZNA4 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RNF111Q6ZNA4 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RNF111Q6ZNA4 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RNF111Q6ZNA4 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RNF111Q6ZNA4 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
RNF111Q6ZNA4 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RNF111Q6ZNA4 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
RNF111Q6ZNA4 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
RNF111Q6ZNA4 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
RNF111Q6ZNA4 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.34■■□□□ 1.01
RNF111Q6ZNA4 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.34■■□□□ 1.01
RNF111Q6ZNA4 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.34■■□□□ 1.01
RNF111Q6ZNA4 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
RNF111Q6ZNA4 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RNF111Q6ZNA4 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
RNF111Q6ZNA4 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
RNF111Q6ZNA4 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.34■■□□□ 1.01
RNF111Q6ZNA4 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RNF111Q6ZNA4 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RNF111Q6ZNA4 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RNF111Q6ZNA4 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RNF111Q6ZNA4 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.33■■□□□ 1.01
RNF111Q6ZNA4 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
RNF111Q6ZNA4 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RNF111Q6ZNA4 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.33■■□□□ 1.01
RNF111Q6ZNA4 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
RNF111Q6ZNA4 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RNF111Q6ZNA4 KRT16P3-201ENST00000439127 1283 ntBASIC21.33■■□□□ 1.01
RNF111Q6ZNA4 AC010997.5-201ENST00000609182 354 ntBASIC21.33■■□□□ 1.01
RNF111Q6ZNA4 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.33■■□□□ 1.01
RNF111Q6ZNA4 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RNF111Q6ZNA4 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
RNF111Q6ZNA4 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.33■■□□□ 1
RNF111Q6ZNA4 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
RNF111Q6ZNA4 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
RNF111Q6ZNA4 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.33■■□□□ 1
RNF111Q6ZNA4 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.33■■□□□ 1
RNF111Q6ZNA4 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
RNF111Q6ZNA4 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RNF111Q6ZNA4 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.32■■□□□ 1
RNF111Q6ZNA4 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
RNF111Q6ZNA4 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.32■■□□□ 1
RNF111Q6ZNA4 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.32■■□□□ 1
RNF111Q6ZNA4 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.32■■□□□ 1
RNF111Q6ZNA4 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.32■■□□□ 1
RNF111Q6ZNA4 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
RNF111Q6ZNA4 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.32■■□□□ 1
RNF111Q6ZNA4 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RNF111Q6ZNA4 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
RNF111Q6ZNA4 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 10.1 ms