Protein–RNA interactions for Protein: Q6UWI4

SHISA2, Protein shisa-2 homolog, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA2Q6UWI4 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHISA2Q6UWI4 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.19■□□□□ 0.34
SHISA2Q6UWI4 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.19■□□□□ 0.34
SHISA2Q6UWI4 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
SHISA2Q6UWI4 AL121832.2-201ENST00000610979 668 ntBASIC17.19■□□□□ 0.34
SHISA2Q6UWI4 BX005040.4-201ENST00000637145 1518 ntBASIC17.19■□□□□ 0.34
SHISA2Q6UWI4 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC17.18■□□□□ 0.34
SHISA2Q6UWI4 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
SHISA2Q6UWI4 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SHISA2Q6UWI4 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SHISA2Q6UWI4 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SHISA2Q6UWI4 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SHISA2Q6UWI4 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SHISA2Q6UWI4 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SHISA2Q6UWI4 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SHISA2Q6UWI4 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SHISA2Q6UWI4 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC17.18■□□□□ 0.34
SHISA2Q6UWI4 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.18■□□□□ 0.34
SHISA2Q6UWI4 KRT18P6-201ENST00000555540 1265 ntBASIC17.18■□□□□ 0.34
SHISA2Q6UWI4 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SHISA2Q6UWI4 STX4-202ENST00000394998 1498 ntTSL 2 BASIC17.18■□□□□ 0.34
SHISA2Q6UWI4 EI24-204ENST00000527235 1625 ntTSL 5 BASIC17.18■□□□□ 0.34
SHISA2Q6UWI4 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC17.18■□□□□ 0.34
SHISA2Q6UWI4 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SHISA2Q6UWI4 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
SHISA2Q6UWI4 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
SHISA2Q6UWI4 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SHISA2Q6UWI4 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SHISA2Q6UWI4 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SHISA2Q6UWI4 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SHISA2Q6UWI4 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SHISA2Q6UWI4 FAM201B-201ENST00000458407 597 ntBASIC17.17■□□□□ 0.34
SHISA2Q6UWI4 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC17.17■□□□□ 0.34
SHISA2Q6UWI4 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC17.17■□□□□ 0.34
SHISA2Q6UWI4 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC17.17■□□□□ 0.34
SHISA2Q6UWI4 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
SHISA2Q6UWI4 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SHISA2Q6UWI4 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SHISA2Q6UWI4 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SHISA2Q6UWI4 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SHISA2Q6UWI4 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC17.16■□□□□ 0.34
SHISA2Q6UWI4 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SHISA2Q6UWI4 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SHISA2Q6UWI4 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SHISA2Q6UWI4 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHISA2Q6UWI4 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC17.16■□□□□ 0.34
SHISA2Q6UWI4 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC17.16■□□□□ 0.34
SHISA2Q6UWI4 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SHISA2Q6UWI4 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
SHISA2Q6UWI4 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.16■□□□□ 0.34
SHISA2Q6UWI4 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
SHISA2Q6UWI4 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC17.16■□□□□ 0.34
SHISA2Q6UWI4 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SHISA2Q6UWI4 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SHISA2Q6UWI4 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SHISA2Q6UWI4 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
SHISA2Q6UWI4 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SHISA2Q6UWI4 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC17.16■□□□□ 0.34
SHISA2Q6UWI4 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHISA2Q6UWI4 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHISA2Q6UWI4 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC17.16■□□□□ 0.34
SHISA2Q6UWI4 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC17.15■□□□□ 0.34
SHISA2Q6UWI4 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC17.15■□□□□ 0.34
SHISA2Q6UWI4 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SHISA2Q6UWI4 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC17.15■□□□□ 0.34
SHISA2Q6UWI4 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SHISA2Q6UWI4 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SHISA2Q6UWI4 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC17.15■□□□□ 0.34
SHISA2Q6UWI4 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SHISA2Q6UWI4 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC17.15■□□□□ 0.34
SHISA2Q6UWI4 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SHISA2Q6UWI4 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SHISA2Q6UWI4 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
SHISA2Q6UWI4 LTK-203ENST00000453182 2412 ntTSL 2 BASIC17.14■□□□□ 0.33
SHISA2Q6UWI4 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17.14■□□□□ 0.33
SHISA2Q6UWI4 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SHISA2Q6UWI4 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC17.14■□□□□ 0.33
SHISA2Q6UWI4 AC083906.2-201ENST00000511578 360 ntBASIC17.14■□□□□ 0.33
SHISA2Q6UWI4 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.14■□□□□ 0.33
SHISA2Q6UWI4 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC17.14■□□□□ 0.33
SHISA2Q6UWI4 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
SHISA2Q6UWI4 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
SHISA2Q6UWI4 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SHISA2Q6UWI4 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SHISA2Q6UWI4 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SHISA2Q6UWI4 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
SHISA2Q6UWI4 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SHISA2Q6UWI4 LINC01529-204ENST00000636474 1715 ntBASIC17.13■□□□□ 0.33
SHISA2Q6UWI4 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SHISA2Q6UWI4 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SHISA2Q6UWI4 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
SHISA2Q6UWI4 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SHISA2Q6UWI4 SLC29A4P1-201ENST00000398760 971 ntBASIC17.13■□□□□ 0.33
SHISA2Q6UWI4 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SHISA2Q6UWI4 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC17.13■□□□□ 0.33
SHISA2Q6UWI4 TSPY6P-201ENST00000448518 926 ntBASIC17.13■□□□□ 0.33
SHISA2Q6UWI4 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
SHISA2Q6UWI4 AC231657.2-201ENST00000624556 255 ntBASIC17.13■□□□□ 0.33
SHISA2Q6UWI4 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SHISA2Q6UWI4 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms