Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PTCRAQ6ISU1 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PTCRAQ6ISU1 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PTCRAQ6ISU1 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PTCRAQ6ISU1 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC23.09■■□□□ 1.29
PTCRAQ6ISU1 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC23.08■■□□□ 1.29
PTCRAQ6ISU1 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PTCRAQ6ISU1 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC23.08■■□□□ 1.29
PTCRAQ6ISU1 KRT18P29-201ENST00000397031 1267 ntBASIC23.08■■□□□ 1.29
PTCRAQ6ISU1 POU5F1P3-201ENST00000428824 1078 ntBASIC23.08■■□□□ 1.29
PTCRAQ6ISU1 ITM2C-210ENST00000620962 501 ntBASIC23.08■■□□□ 1.29
PTCRAQ6ISU1 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
PTCRAQ6ISU1 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
PTCRAQ6ISU1 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC23.07■■□□□ 1.28
PTCRAQ6ISU1 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC23.07■■□□□ 1.28
PTCRAQ6ISU1 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC23.07■■□□□ 1.28
PTCRAQ6ISU1 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PTCRAQ6ISU1 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC23.07■■□□□ 1.28
PTCRAQ6ISU1 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC23.07■■□□□ 1.28
PTCRAQ6ISU1 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC23.07■■□□□ 1.28
PTCRAQ6ISU1 DUX4L16-201ENST00000555130 1264 ntBASIC23.07■■□□□ 1.28
PTCRAQ6ISU1 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC23.07■■□□□ 1.28
PTCRAQ6ISU1 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PTCRAQ6ISU1 PKM-203ENST00000389093 2279 ntTSL 5 BASIC23.07■■□□□ 1.28
PTCRAQ6ISU1 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC23.07■■□□□ 1.28
PTCRAQ6ISU1 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
PTCRAQ6ISU1 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PTCRAQ6ISU1 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PTCRAQ6ISU1 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PTCRAQ6ISU1 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
PTCRAQ6ISU1 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PTCRAQ6ISU1 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
PTCRAQ6ISU1 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC23.06■■□□□ 1.28
PTCRAQ6ISU1 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PTCRAQ6ISU1 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC23.06■■□□□ 1.28
PTCRAQ6ISU1 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PTCRAQ6ISU1 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC23.06■■□□□ 1.28
PTCRAQ6ISU1 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
PTCRAQ6ISU1 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC23.06■■□□□ 1.28
PTCRAQ6ISU1 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC23.06■■□□□ 1.28
PTCRAQ6ISU1 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PTCRAQ6ISU1 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PTCRAQ6ISU1 AC092803.2-201ENST00000564287 1899 ntBASIC23.05■■□□□ 1.28
PTCRAQ6ISU1 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PTCRAQ6ISU1 HLA-L-211ENST00000482052 1765 ntBASIC23.05■■□□□ 1.28
PTCRAQ6ISU1 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
PTCRAQ6ISU1 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC23.05■■□□□ 1.28
PTCRAQ6ISU1 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PTCRAQ6ISU1 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC23.05■■□□□ 1.28
PTCRAQ6ISU1 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PTCRAQ6ISU1 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC23.05■■□□□ 1.28
PTCRAQ6ISU1 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC23.05■■□□□ 1.28
PTCRAQ6ISU1 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PTCRAQ6ISU1 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
PTCRAQ6ISU1 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC23.05■■□□□ 1.28
PTCRAQ6ISU1 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PTCRAQ6ISU1 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC23.04■■□□□ 1.28
PTCRAQ6ISU1 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC23.04■■□□□ 1.28
PTCRAQ6ISU1 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
PTCRAQ6ISU1 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC23.04■■□□□ 1.28
PTCRAQ6ISU1 AC073210.2-201ENST00000430369 194 ntBASIC23.04■■□□□ 1.28
PTCRAQ6ISU1 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC23.04■■□□□ 1.28
PTCRAQ6ISU1 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC23.04■■□□□ 1.28
PTCRAQ6ISU1 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC23.04■■□□□ 1.28
PTCRAQ6ISU1 CPT2-209ENST00000636935 803 ntTSL 5 BASIC23.04■■□□□ 1.28
PTCRAQ6ISU1 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
PTCRAQ6ISU1 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PTCRAQ6ISU1 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC23.04■■□□□ 1.28
PTCRAQ6ISU1 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PTCRAQ6ISU1 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PTCRAQ6ISU1 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PTCRAQ6ISU1 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PTCRAQ6ISU1 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PTCRAQ6ISU1 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC23.03■■□□□ 1.28
PTCRAQ6ISU1 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC23.03■■□□□ 1.28
PTCRAQ6ISU1 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC23.03■■□□□ 1.28
PTCRAQ6ISU1 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC23.03■■□□□ 1.28
PTCRAQ6ISU1 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC23.03■■□□□ 1.28
PTCRAQ6ISU1 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
PTCRAQ6ISU1 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PTCRAQ6ISU1 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
PTCRAQ6ISU1 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
PTCRAQ6ISU1 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
PTCRAQ6ISU1 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
PTCRAQ6ISU1 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC23.02■■□□□ 1.28
PTCRAQ6ISU1 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PTCRAQ6ISU1 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
PTCRAQ6ISU1 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC23.02■■□□□ 1.28
PTCRAQ6ISU1 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
PTCRAQ6ISU1 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PTCRAQ6ISU1 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PTCRAQ6ISU1 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
PTCRAQ6ISU1 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
PTCRAQ6ISU1 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
PTCRAQ6ISU1 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PTCRAQ6ISU1 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC23.01■■□□□ 1.27
PTCRAQ6ISU1 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC23.01■■□□□ 1.27
PTCRAQ6ISU1 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC23.01■■□□□ 1.27
PTCRAQ6ISU1 LINC01529-204ENST00000636474 1715 ntBASIC23.01■■□□□ 1.27
PTCRAQ6ISU1 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms