Protein–RNA interactions for Protein: Q5VT28

FAM27B, Protein FAM27A/B/C, humanhuman

Predictions only

Length 67 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM27BQ5VT28 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
FAM27BQ5VT28 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
FAM27BQ5VT28 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
FAM27BQ5VT28 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
FAM27BQ5VT28 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.35■□□□□ 0.69
FAM27BQ5VT28 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
FAM27BQ5VT28 MIR3181-201ENST00000578512 73 ntBASIC19.35■□□□□ 0.69
FAM27BQ5VT28 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
FAM27BQ5VT28 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.35■□□□□ 0.69
FAM27BQ5VT28 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.35■□□□□ 0.69
FAM27BQ5VT28 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.35■□□□□ 0.69
FAM27BQ5VT28 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
FAM27BQ5VT28 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
FAM27BQ5VT28 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
FAM27BQ5VT28 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
FAM27BQ5VT28 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
FAM27BQ5VT28 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
FAM27BQ5VT28 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
FAM27BQ5VT28 AC133637.1-201ENST00000624115 1537 ntBASIC19.35■□□□□ 0.69
FAM27BQ5VT28 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
FAM27BQ5VT28 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
FAM27BQ5VT28 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.34■□□□□ 0.69
FAM27BQ5VT28 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.34■□□□□ 0.69
FAM27BQ5VT28 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
FAM27BQ5VT28 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.34■□□□□ 0.69
FAM27BQ5VT28 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
FAM27BQ5VT28 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
FAM27BQ5VT28 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
FAM27BQ5VT28 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
FAM27BQ5VT28 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
FAM27BQ5VT28 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
FAM27BQ5VT28 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
FAM27BQ5VT28 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
FAM27BQ5VT28 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
FAM27BQ5VT28 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
FAM27BQ5VT28 AC087742.1-201ENST00000575880 1738 ntBASIC19.33■□□□□ 0.68
FAM27BQ5VT28 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC19.33■□□□□ 0.68
FAM27BQ5VT28 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.32■□□□□ 0.68
FAM27BQ5VT28 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
FAM27BQ5VT28 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
FAM27BQ5VT28 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
FAM27BQ5VT28 SYT6-210ENST00000641643 1587 ntBASIC19.32■□□□□ 0.68
FAM27BQ5VT28 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FAM27BQ5VT28 AC127496.7-201ENST00000625110 1798 ntBASIC19.32■□□□□ 0.68
FAM27BQ5VT28 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FAM27BQ5VT28 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.32■□□□□ 0.68
FAM27BQ5VT28 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.32■□□□□ 0.68
FAM27BQ5VT28 AL138724.1-201ENST00000606771 1088 ntBASIC19.32■□□□□ 0.68
FAM27BQ5VT28 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
FAM27BQ5VT28 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FAM27BQ5VT28 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
FAM27BQ5VT28 AL117328.2-201ENST00000624617 1940 ntBASIC19.31■□□□□ 0.68
FAM27BQ5VT28 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
FAM27BQ5VT28 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.31■□□□□ 0.68
FAM27BQ5VT28 LINC01960-201ENST00000563759 1884 ntBASIC19.31■□□□□ 0.68
FAM27BQ5VT28 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FAM27BQ5VT28 AL136116.3-201ENST00000402907 1138 ntBASIC19.31■□□□□ 0.68
FAM27BQ5VT28 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.31■□□□□ 0.68
FAM27BQ5VT28 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.31■□□□□ 0.68
FAM27BQ5VT28 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.31■□□□□ 0.68
FAM27BQ5VT28 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
FAM27BQ5VT28 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FAM27BQ5VT28 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FAM27BQ5VT28 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
FAM27BQ5VT28 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
FAM27BQ5VT28 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
FAM27BQ5VT28 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.3■□□□□ 0.68
FAM27BQ5VT28 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
FAM27BQ5VT28 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
FAM27BQ5VT28 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
FAM27BQ5VT28 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
FAM27BQ5VT28 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
FAM27BQ5VT28 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.3■□□□□ 0.68
FAM27BQ5VT28 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.3■□□□□ 0.68
FAM27BQ5VT28 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
FAM27BQ5VT28 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
FAM27BQ5VT28 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
FAM27BQ5VT28 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
FAM27BQ5VT28 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
FAM27BQ5VT28 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
FAM27BQ5VT28 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
FAM27BQ5VT28 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
FAM27BQ5VT28 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.29■□□□□ 0.68
FAM27BQ5VT28 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
FAM27BQ5VT28 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.29■□□□□ 0.68
FAM27BQ5VT28 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.29■□□□□ 0.68
FAM27BQ5VT28 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
FAM27BQ5VT28 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
FAM27BQ5VT28 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
FAM27BQ5VT28 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.29■□□□□ 0.68
FAM27BQ5VT28 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
FAM27BQ5VT28 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
FAM27BQ5VT28 GUSBP5-202ENST00000510805 1989 ntBASIC19.28■□□□□ 0.68
FAM27BQ5VT28 SERBP1P1-201ENST00000396021 1160 ntBASIC19.28■□□□□ 0.68
FAM27BQ5VT28 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
FAM27BQ5VT28 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.28■□□□□ 0.68
FAM27BQ5VT28 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
FAM27BQ5VT28 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
FAM27BQ5VT28 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
FAM27BQ5VT28 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms