Protein–RNA interactions for Protein: Q52LC2

ATP6AP1L, V-type proton ATPase subunit S1-like protein, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6AP1LQ52LC2 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.3■■□□□ 1
ATP6AP1LQ52LC2 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ATP6AP1LQ52LC2 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.3■■□□□ 1
ATP6AP1LQ52LC2 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
ATP6AP1LQ52LC2 AC087742.1-201ENST00000575880 1738 ntBASIC21.3■■□□□ 1
ATP6AP1LQ52LC2 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.3■■□□□ 1
ATP6AP1LQ52LC2 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
ATP6AP1LQ52LC2 BX664725.1-201ENST00000438252 379 ntBASIC21.3■■□□□ 1
ATP6AP1LQ52LC2 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ATP6AP1LQ52LC2 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ATP6AP1LQ52LC2 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ATP6AP1LQ52LC2 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.3■■□□□ 1
ATP6AP1LQ52LC2 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ATP6AP1LQ52LC2 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ATP6AP1LQ52LC2 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ATP6AP1LQ52LC2 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.29■■□□□ 1
ATP6AP1LQ52LC2 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.29■■□□□ 1
ATP6AP1LQ52LC2 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
ATP6AP1LQ52LC2 AC080038.3-201ENST00000623346 1952 ntBASIC21.29■■□□□ 1
ATP6AP1LQ52LC2 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
ATP6AP1LQ52LC2 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.29■■□□□ 1
ATP6AP1LQ52LC2 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.29■■□□□ 1
ATP6AP1LQ52LC2 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.28■■□□□ 1
ATP6AP1LQ52LC2 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
ATP6AP1LQ52LC2 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ATP6AP1LQ52LC2 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ATP6AP1LQ52LC2 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.28■■□□□ 1
ATP6AP1LQ52LC2 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.28■■□□□ 1
ATP6AP1LQ52LC2 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
ATP6AP1LQ52LC2 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
ATP6AP1LQ52LC2 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
ATP6AP1LQ52LC2 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.28■■□□□ 1
ATP6AP1LQ52LC2 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ATP6AP1LQ52LC2 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.28■■□□□ 1
ATP6AP1LQ52LC2 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ATP6AP1LQ52LC2 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ATP6AP1LQ52LC2 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.27■■□□□ 1
ATP6AP1LQ52LC2 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ATP6AP1LQ52LC2 C11orf96-202ENST00000528572 1834 ntBASIC21.27■■□□□ 1
ATP6AP1LQ52LC2 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
ATP6AP1LQ52LC2 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
ATP6AP1LQ52LC2 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
ATP6AP1LQ52LC2 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
ATP6AP1LQ52LC2 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ATP6AP1LQ52LC2 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
ATP6AP1LQ52LC2 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.27■□□□□ 0.99
ATP6AP1LQ52LC2 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.26■□□□□ 0.99
ATP6AP1LQ52LC2 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
ATP6AP1LQ52LC2 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.26■□□□□ 0.99
ATP6AP1LQ52LC2 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
ATP6AP1LQ52LC2 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
ATP6AP1LQ52LC2 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
ATP6AP1LQ52LC2 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
ATP6AP1LQ52LC2 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
ATP6AP1LQ52LC2 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ATP6AP1LQ52LC2 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
ATP6AP1LQ52LC2 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ATP6AP1LQ52LC2 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.26■□□□□ 0.99
ATP6AP1LQ52LC2 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ATP6AP1LQ52LC2 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.26■□□□□ 0.99
ATP6AP1LQ52LC2 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
ATP6AP1LQ52LC2 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ATP6AP1LQ52LC2 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
ATP6AP1LQ52LC2 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ATP6AP1LQ52LC2 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATP6AP1LQ52LC2 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
ATP6AP1LQ52LC2 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
ATP6AP1LQ52LC2 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATP6AP1LQ52LC2 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.25■□□□□ 0.99
ATP6AP1LQ52LC2 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATP6AP1LQ52LC2 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ATP6AP1LQ52LC2 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATP6AP1LQ52LC2 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.25■□□□□ 0.99
ATP6AP1LQ52LC2 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.25■□□□□ 0.99
ATP6AP1LQ52LC2 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATP6AP1LQ52LC2 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ATP6AP1LQ52LC2 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.24■□□□□ 0.99
ATP6AP1LQ52LC2 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
ATP6AP1LQ52LC2 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.24■□□□□ 0.99
ATP6AP1LQ52LC2 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
ATP6AP1LQ52LC2 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.24■□□□□ 0.99
ATP6AP1LQ52LC2 AC009086.3-201ENST00000623486 1008 ntBASIC21.24■□□□□ 0.99
ATP6AP1LQ52LC2 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATP6AP1LQ52LC2 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATP6AP1LQ52LC2 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ATP6AP1LQ52LC2 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
ATP6AP1LQ52LC2 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ATP6AP1LQ52LC2 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.23■□□□□ 0.99
ATP6AP1LQ52LC2 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
ATP6AP1LQ52LC2 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.23■□□□□ 0.99
ATP6AP1LQ52LC2 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ATP6AP1LQ52LC2 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.23■□□□□ 0.99
ATP6AP1LQ52LC2 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ATP6AP1LQ52LC2 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.23■□□□□ 0.99
ATP6AP1LQ52LC2 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.23■□□□□ 0.99
ATP6AP1LQ52LC2 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.23■□□□□ 0.99
ATP6AP1LQ52LC2 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ATP6AP1LQ52LC2 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.23■□□□□ 0.99
ATP6AP1LQ52LC2 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
ATP6AP1LQ52LC2 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms