Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC25.4■■□□□ 1.66
USH1GQ495M9 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
USH1GQ495M9 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
USH1GQ495M9 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
USH1GQ495M9 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
USH1GQ495M9 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC25.39■■□□□ 1.66
USH1GQ495M9 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
USH1GQ495M9 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.66
USH1GQ495M9 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
USH1GQ495M9 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
USH1GQ495M9 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
USH1GQ495M9 NME4-202ENST00000382940 766 ntTSL 3 BASIC25.39■■□□□ 1.66
USH1GQ495M9 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC25.39■■□□□ 1.66
USH1GQ495M9 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC25.39■■□□□ 1.66
USH1GQ495M9 NME4-211ENST00000620944 1193 ntTSL 2 BASIC25.39■■□□□ 1.66
USH1GQ495M9 MIR6084-201ENST00000622012 110 ntBASIC25.39■■□□□ 1.66
USH1GQ495M9 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.65
USH1GQ495M9 AC092068.2-201ENST00000590491 1708 ntBASIC25.39■■□□□ 1.65
USH1GQ495M9 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC25.39■■□□□ 1.65
USH1GQ495M9 MIR572-201ENST00000384983 95 ntBASIC25.38■■□□□ 1.65
USH1GQ495M9 AP005435.1-201ENST00000529293 1178 ntBASIC25.38■■□□□ 1.65
USH1GQ495M9 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC25.38■■□□□ 1.65
USH1GQ495M9 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC25.38■■□□□ 1.65
USH1GQ495M9 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
USH1GQ495M9 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
USH1GQ495M9 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
USH1GQ495M9 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC25.37■■□□□ 1.65
USH1GQ495M9 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC25.37■■□□□ 1.65
USH1GQ495M9 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
USH1GQ495M9 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
USH1GQ495M9 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC25.37■■□□□ 1.65
USH1GQ495M9 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC25.37■■□□□ 1.65
USH1GQ495M9 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
USH1GQ495M9 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
USH1GQ495M9 PLD4-205ENST00000553861 667 ntTSL 2 BASIC25.37■■□□□ 1.65
USH1GQ495M9 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
USH1GQ495M9 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC25.37■■□□□ 1.65
USH1GQ495M9 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
USH1GQ495M9 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC25.37■■□□□ 1.65
USH1GQ495M9 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
USH1GQ495M9 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
USH1GQ495M9 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
USH1GQ495M9 AK1-201ENST00000223836 736 ntTSL 3 BASIC25.36■■□□□ 1.65
USH1GQ495M9 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC25.36■■□□□ 1.65
USH1GQ495M9 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC25.36■■□□□ 1.65
USH1GQ495M9 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC25.36■■□□□ 1.65
USH1GQ495M9 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC25.36■■□□□ 1.65
USH1GQ495M9 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC25.36■■□□□ 1.65
USH1GQ495M9 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
USH1GQ495M9 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
USH1GQ495M9 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
USH1GQ495M9 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
USH1GQ495M9 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
USH1GQ495M9 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC25.35■■□□□ 1.65
USH1GQ495M9 ANKRD20A6P-201ENST00000618763 204 ntBASIC25.35■■□□□ 1.65
USH1GQ495M9 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC25.35■■□□□ 1.65
USH1GQ495M9 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC25.34■■□□□ 1.65
USH1GQ495M9 EI24-211ENST00000534546 1544 ntTSL 2 BASIC25.34■■□□□ 1.65
USH1GQ495M9 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
USH1GQ495M9 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC25.34■■□□□ 1.65
USH1GQ495M9 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
USH1GQ495M9 AC012414.1-201ENST00000556676 535 ntBASIC25.34■■□□□ 1.65
USH1GQ495M9 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
USH1GQ495M9 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
USH1GQ495M9 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC25.33■■□□□ 1.65
USH1GQ495M9 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
USH1GQ495M9 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC25.33■■□□□ 1.65
USH1GQ495M9 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
USH1GQ495M9 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
USH1GQ495M9 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
USH1GQ495M9 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
USH1GQ495M9 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
USH1GQ495M9 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
USH1GQ495M9 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC25.33■■□□□ 1.64
USH1GQ495M9 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC25.32■■□□□ 1.64
USH1GQ495M9 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
USH1GQ495M9 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
USH1GQ495M9 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
USH1GQ495M9 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC25.32■■□□□ 1.64
USH1GQ495M9 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC25.32■■□□□ 1.64
USH1GQ495M9 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC25.32■■□□□ 1.64
USH1GQ495M9 AL358852.1-201ENST00000623174 1268 ntBASIC25.32■■□□□ 1.64
USH1GQ495M9 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC25.32■■□□□ 1.64
USH1GQ495M9 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
USH1GQ495M9 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
USH1GQ495M9 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
USH1GQ495M9 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC25.31■■□□□ 1.64
USH1GQ495M9 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC25.31■■□□□ 1.64
USH1GQ495M9 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC25.31■■□□□ 1.64
USH1GQ495M9 AL031602.1-201ENST00000633169 911 ntBASIC25.31■■□□□ 1.64
USH1GQ495M9 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
USH1GQ495M9 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
USH1GQ495M9 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
USH1GQ495M9 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
USH1GQ495M9 RARA-203ENST00000394086 2008 ntTSL 2 BASIC25.3■■□□□ 1.64
USH1GQ495M9 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
USH1GQ495M9 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC25.3■■□□□ 1.64
USH1GQ495M9 LHPP-203ENST00000392757 840 ntTSL 3 BASIC25.3■■□□□ 1.64
USH1GQ495M9 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC25.3■■□□□ 1.64
USH1GQ495M9 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC25.3■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms