Protein–RNA interactions for Protein: Q3KNV8

PCGF3, Polycomb group RING finger protein 3, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3Q3KNV8 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCGF3Q3KNV8 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCGF3Q3KNV8 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCGF3Q3KNV8 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCGF3Q3KNV8 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCGF3Q3KNV8 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCGF3Q3KNV8 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCGF3Q3KNV8 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCGF3Q3KNV8 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCGF3Q3KNV8 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.43■□□□□ 0.7
PCGF3Q3KNV8 AC007375.3-201ENST00000600936 2314 ntBASIC19.43■□□□□ 0.7
PCGF3Q3KNV8 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCGF3Q3KNV8 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCGF3Q3KNV8 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCGF3Q3KNV8 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.43■□□□□ 0.7
PCGF3Q3KNV8 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCGF3Q3KNV8 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PCGF3Q3KNV8 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
PCGF3Q3KNV8 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCGF3Q3KNV8 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.42■□□□□ 0.7
PCGF3Q3KNV8 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PCGF3Q3KNV8 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.42■□□□□ 0.7
PCGF3Q3KNV8 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCGF3Q3KNV8 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PCGF3Q3KNV8 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCGF3Q3KNV8 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
PCGF3Q3KNV8 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.42■□□□□ 0.7
PCGF3Q3KNV8 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PCGF3Q3KNV8 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCGF3Q3KNV8 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCGF3Q3KNV8 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCGF3Q3KNV8 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PCGF3Q3KNV8 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
PCGF3Q3KNV8 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
PCGF3Q3KNV8 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCGF3Q3KNV8 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCGF3Q3KNV8 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.41■□□□□ 0.7
PCGF3Q3KNV8 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCGF3Q3KNV8 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PCGF3Q3KNV8 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
PCGF3Q3KNV8 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCGF3Q3KNV8 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PCGF3Q3KNV8 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.41■□□□□ 0.7
PCGF3Q3KNV8 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCGF3Q3KNV8 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCGF3Q3KNV8 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCGF3Q3KNV8 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCGF3Q3KNV8 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.41■□□□□ 0.7
PCGF3Q3KNV8 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.4■□□□□ 0.7
PCGF3Q3KNV8 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PCGF3Q3KNV8 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCGF3Q3KNV8 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
PCGF3Q3KNV8 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.4■□□□□ 0.7
PCGF3Q3KNV8 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.4■□□□□ 0.7
PCGF3Q3KNV8 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCGF3Q3KNV8 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCGF3Q3KNV8 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.4■□□□□ 0.7
PCGF3Q3KNV8 AC131281.2-201ENST00000520478 145 ntBASIC19.4■□□□□ 0.7
PCGF3Q3KNV8 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
PCGF3Q3KNV8 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCGF3Q3KNV8 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCGF3Q3KNV8 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCGF3Q3KNV8 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
PCGF3Q3KNV8 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PCGF3Q3KNV8 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
PCGF3Q3KNV8 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PCGF3Q3KNV8 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.39■□□□□ 0.69
PCGF3Q3KNV8 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.39■□□□□ 0.69
PCGF3Q3KNV8 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCGF3Q3KNV8 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PCGF3Q3KNV8 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.39■□□□□ 0.69
PCGF3Q3KNV8 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.39■□□□□ 0.69
PCGF3Q3KNV8 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCGF3Q3KNV8 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
PCGF3Q3KNV8 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCGF3Q3KNV8 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
PCGF3Q3KNV8 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCGF3Q3KNV8 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCGF3Q3KNV8 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCGF3Q3KNV8 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PCGF3Q3KNV8 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
PCGF3Q3KNV8 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.38■□□□□ 0.69
PCGF3Q3KNV8 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.38■□□□□ 0.69
PCGF3Q3KNV8 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.38■□□□□ 0.69
PCGF3Q3KNV8 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PCGF3Q3KNV8 AL024507.2-201ENST00000606070 2574 ntBASIC19.38■□□□□ 0.69
PCGF3Q3KNV8 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCGF3Q3KNV8 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
PCGF3Q3KNV8 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCGF3Q3KNV8 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
PCGF3Q3KNV8 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCGF3Q3KNV8 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PCGF3Q3KNV8 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PCGF3Q3KNV8 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PCGF3Q3KNV8 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.37■□□□□ 0.69
PCGF3Q3KNV8 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
PCGF3Q3KNV8 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCGF3Q3KNV8 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCGF3Q3KNV8 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCGF3Q3KNV8 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms