Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRICKLE4Q2TBC4 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
PRICKLE4Q2TBC4 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.6■□□□□ 0.89
PRICKLE4Q2TBC4 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PRICKLE4Q2TBC4 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.6■□□□□ 0.89
PRICKLE4Q2TBC4 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.6■□□□□ 0.89
PRICKLE4Q2TBC4 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.59■□□□□ 0.89
PRICKLE4Q2TBC4 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PRICKLE4Q2TBC4 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRICKLE4Q2TBC4 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRICKLE4Q2TBC4 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.59■□□□□ 0.89
PRICKLE4Q2TBC4 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.59■□□□□ 0.89
PRICKLE4Q2TBC4 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.59■□□□□ 0.89
PRICKLE4Q2TBC4 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRICKLE4Q2TBC4 UNC93B3-201ENST00000308076 687 ntBASIC20.59■□□□□ 0.89
PRICKLE4Q2TBC4 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.59■□□□□ 0.89
PRICKLE4Q2TBC4 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRICKLE4Q2TBC4 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
PRICKLE4Q2TBC4 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.59■□□□□ 0.89
PRICKLE4Q2TBC4 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.58■□□□□ 0.89
PRICKLE4Q2TBC4 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PRICKLE4Q2TBC4 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PRICKLE4Q2TBC4 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
PRICKLE4Q2TBC4 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
PRICKLE4Q2TBC4 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.58■□□□□ 0.89
PRICKLE4Q2TBC4 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PRICKLE4Q2TBC4 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
PRICKLE4Q2TBC4 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PRICKLE4Q2TBC4 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PRICKLE4Q2TBC4 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRICKLE4Q2TBC4 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRICKLE4Q2TBC4 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRICKLE4Q2TBC4 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.57■□□□□ 0.88
PRICKLE4Q2TBC4 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.57■□□□□ 0.88
PRICKLE4Q2TBC4 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.57■□□□□ 0.88
PRICKLE4Q2TBC4 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PRICKLE4Q2TBC4 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PRICKLE4Q2TBC4 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.57■□□□□ 0.88
PRICKLE4Q2TBC4 AC136469.2-201ENST00000623944 1028 ntBASIC20.57■□□□□ 0.88
PRICKLE4Q2TBC4 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRICKLE4Q2TBC4 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.57■□□□□ 0.88
PRICKLE4Q2TBC4 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRICKLE4Q2TBC4 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
PRICKLE4Q2TBC4 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRICKLE4Q2TBC4 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRICKLE4Q2TBC4 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
PRICKLE4Q2TBC4 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
PRICKLE4Q2TBC4 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.56■□□□□ 0.88
PRICKLE4Q2TBC4 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.56■□□□□ 0.88
PRICKLE4Q2TBC4 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.56■□□□□ 0.88
PRICKLE4Q2TBC4 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.56■□□□□ 0.88
PRICKLE4Q2TBC4 ESRRAP2-201ENST00000418437 1549 ntBASIC20.56■□□□□ 0.88
PRICKLE4Q2TBC4 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PRICKLE4Q2TBC4 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PRICKLE4Q2TBC4 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PRICKLE4Q2TBC4 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
PRICKLE4Q2TBC4 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PRICKLE4Q2TBC4 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
PRICKLE4Q2TBC4 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PRICKLE4Q2TBC4 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
PRICKLE4Q2TBC4 AC096631.2-201ENST00000436136 790 ntBASIC20.55■□□□□ 0.88
PRICKLE4Q2TBC4 OR2I1P-207ENST00000453522 948 ntBASIC20.55■□□□□ 0.88
PRICKLE4Q2TBC4 LINC01960-201ENST00000563759 1884 ntBASIC20.55■□□□□ 0.88
PRICKLE4Q2TBC4 AC087742.1-201ENST00000575880 1738 ntBASIC20.55■□□□□ 0.88
PRICKLE4Q2TBC4 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
PRICKLE4Q2TBC4 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
PRICKLE4Q2TBC4 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRICKLE4Q2TBC4 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.54■□□□□ 0.88
PRICKLE4Q2TBC4 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRICKLE4Q2TBC4 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRICKLE4Q2TBC4 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PRICKLE4Q2TBC4 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.54■□□□□ 0.88
PRICKLE4Q2TBC4 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PRICKLE4Q2TBC4 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PRICKLE4Q2TBC4 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PRICKLE4Q2TBC4 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
PRICKLE4Q2TBC4 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.54■□□□□ 0.88
PRICKLE4Q2TBC4 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PRICKLE4Q2TBC4 AL136162.1-201ENST00000607711 1078 ntBASIC20.54■□□□□ 0.88
PRICKLE4Q2TBC4 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.54■□□□□ 0.88
PRICKLE4Q2TBC4 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.54■□□□□ 0.88
PRICKLE4Q2TBC4 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRICKLE4Q2TBC4 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.54■□□□□ 0.88
PRICKLE4Q2TBC4 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
PRICKLE4Q2TBC4 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.53■□□□□ 0.88
PRICKLE4Q2TBC4 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.53■□□□□ 0.88
PRICKLE4Q2TBC4 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
PRICKLE4Q2TBC4 AC024257.2-201ENST00000549699 147 ntBASIC20.53■□□□□ 0.88
PRICKLE4Q2TBC4 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRICKLE4Q2TBC4 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.53■□□□□ 0.88
PRICKLE4Q2TBC4 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
PRICKLE4Q2TBC4 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.53■□□□□ 0.88
PRICKLE4Q2TBC4 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRICKLE4Q2TBC4 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PRICKLE4Q2TBC4 AC233723.2-201ENST00000623798 2106 ntBASIC20.53■□□□□ 0.88
PRICKLE4Q2TBC4 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.53■□□□□ 0.88
PRICKLE4Q2TBC4 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
PRICKLE4Q2TBC4 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
PRICKLE4Q2TBC4 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRICKLE4Q2TBC4 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms