Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC39.65■■■■□ 3.94
HMGXB3Q12766 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC39.65■■■■□ 3.94
HMGXB3Q12766 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC39.65■■■■□ 3.94
HMGXB3Q12766 SMUG1P1-201ENST00000590640 811 ntBASIC39.65■■■■□ 3.94
HMGXB3Q12766 AC231657.2-201ENST00000624556 255 ntBASIC39.65■■■■□ 3.94
HMGXB3Q12766 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC39.65■■■■□ 3.94
HMGXB3Q12766 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC39.65■■■■□ 3.94
HMGXB3Q12766 DUX4L16-201ENST00000555130 1264 ntBASIC39.65■■■■□ 3.94
HMGXB3Q12766 DET1-205ENST00000558413 583 ntTSL 4 BASIC39.65■■■■□ 3.94
HMGXB3Q12766 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC39.64■■■■□ 3.94
HMGXB3Q12766 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC39.64■■■■□ 3.94
HMGXB3Q12766 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC39.64■■■■□ 3.94
HMGXB3Q12766 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC39.64■■■■□ 3.94
HMGXB3Q12766 SHF-207ENST00000560540 2062 ntTSL 5 BASIC39.64■■■■□ 3.94
HMGXB3Q12766 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC39.64■■■■□ 3.94
HMGXB3Q12766 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC39.63■■■■□ 3.93
HMGXB3Q12766 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC39.63■■■■□ 3.93
HMGXB3Q12766 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC39.63■■■■□ 3.93
HMGXB3Q12766 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC39.63■■■■□ 3.93
HMGXB3Q12766 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC39.63■■■■□ 3.93
HMGXB3Q12766 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC39.63■■■■□ 3.93
HMGXB3Q12766 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC39.63■■■■□ 3.93
HMGXB3Q12766 TESC-206ENST00000541210 936 ntTSL 3 BASIC39.63■■■■□ 3.93
HMGXB3Q12766 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC39.63■■■■□ 3.93
HMGXB3Q12766 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC39.62■■■■□ 3.93
HMGXB3Q12766 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC39.62■■■■□ 3.93
HMGXB3Q12766 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC39.62■■■■□ 3.93
HMGXB3Q12766 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC39.62■■■■□ 3.93
HMGXB3Q12766 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC39.62■■■■□ 3.93
HMGXB3Q12766 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC39.62■■■■□ 3.93
HMGXB3Q12766 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC39.62■■■■□ 3.93
HMGXB3Q12766 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC39.62■■■■□ 3.93
HMGXB3Q12766 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC39.62■■■■□ 3.93
HMGXB3Q12766 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC39.61■■■■□ 3.93
HMGXB3Q12766 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC39.61■■■■□ 3.93
HMGXB3Q12766 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC39.61■■■■□ 3.93
HMGXB3Q12766 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC39.61■■■■□ 3.93
HMGXB3Q12766 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC39.61■■■■□ 3.93
HMGXB3Q12766 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC39.6■■■■□ 3.93
HMGXB3Q12766 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC39.6■■■■□ 3.93
HMGXB3Q12766 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC39.6■■■■□ 3.93
HMGXB3Q12766 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC39.6■■■■□ 3.93
HMGXB3Q12766 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC39.6■■■■□ 3.93
HMGXB3Q12766 AC083906.2-201ENST00000511578 360 ntBASIC39.6■■■■□ 3.93
HMGXB3Q12766 AC073210.2-201ENST00000430369 194 ntBASIC39.59■■■■□ 3.93
HMGXB3Q12766 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC39.59■■■■□ 3.93
HMGXB3Q12766 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC39.59■■■■□ 3.93
HMGXB3Q12766 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC39.59■■■■□ 3.93
HMGXB3Q12766 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC39.58■■■■□ 3.93
HMGXB3Q12766 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC39.58■■■■□ 3.93
HMGXB3Q12766 AC079140.4-201ENST00000507448 529 ntBASIC39.58■■■■□ 3.93
HMGXB3Q12766 AC008687.6-201ENST00000596318 630 ntBASIC39.58■■■■□ 3.93
HMGXB3Q12766 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC39.58■■■■□ 3.93
HMGXB3Q12766 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC39.58■■■■□ 3.93
HMGXB3Q12766 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC39.58■■■■□ 3.93
HMGXB3Q12766 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC39.57■■■■□ 3.93
HMGXB3Q12766 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC39.57■■■■□ 3.93
HMGXB3Q12766 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC39.57■■■■□ 3.93
HMGXB3Q12766 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC39.57■■■■□ 3.93
HMGXB3Q12766 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC39.57■■■■□ 3.92
HMGXB3Q12766 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC39.56■■■■□ 3.92
HMGXB3Q12766 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC39.56■■■■□ 3.92
HMGXB3Q12766 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC39.56■■■■□ 3.92
HMGXB3Q12766 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC39.56■■■■□ 3.92
HMGXB3Q12766 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC39.56■■■■□ 3.92
HMGXB3Q12766 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC39.56■■■■□ 3.92
HMGXB3Q12766 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC39.56■■■■□ 3.92
HMGXB3Q12766 AC005181.1-201ENST00000604782 1256 ntBASIC39.56■■■■□ 3.92
HMGXB3Q12766 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC39.56■■■■□ 3.92
HMGXB3Q12766 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC39.55■■■■□ 3.92
HMGXB3Q12766 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC39.55■■■■□ 3.92
HMGXB3Q12766 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC39.55■■■■□ 3.92
HMGXB3Q12766 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC39.55■■■■□ 3.92
HMGXB3Q12766 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC39.55■■■■□ 3.92
HMGXB3Q12766 RGMA-211ENST00000557420 989 ntTSL 3 BASIC39.55■■■■□ 3.92
HMGXB3Q12766 UBE2DNL-204ENST00000602536 740 ntBASIC39.55■■■■□ 3.92
HMGXB3Q12766 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC39.54■■■■□ 3.92
HMGXB3Q12766 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC39.54■■■■□ 3.92
HMGXB3Q12766 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC39.54■■■■□ 3.92
HMGXB3Q12766 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC39.54■■■■□ 3.92
HMGXB3Q12766 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC39.54■■■■□ 3.92
HMGXB3Q12766 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC39.53■■■■□ 3.92
HMGXB3Q12766 LINC01529-204ENST00000636474 1715 ntBASIC39.53■■■■□ 3.92
HMGXB3Q12766 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC39.53■■■■□ 3.92
HMGXB3Q12766 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC39.53■■■■□ 3.92
HMGXB3Q12766 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC39.53■■■■□ 3.92
HMGXB3Q12766 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC39.52■■■■□ 3.92
HMGXB3Q12766 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC39.52■■■■□ 3.92
HMGXB3Q12766 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC39.52■■■■□ 3.92
HMGXB3Q12766 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC39.52■■■■□ 3.92
HMGXB3Q12766 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC39.51■■■■□ 3.92
HMGXB3Q12766 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC39.51■■■■□ 3.92
HMGXB3Q12766 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC39.51■■■■□ 3.91
HMGXB3Q12766 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC39.5■■■■□ 3.91
HMGXB3Q12766 SLC29A4P1-201ENST00000398760 971 ntBASIC39.5■■■■□ 3.91
HMGXB3Q12766 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC39.5■■■■□ 3.91
HMGXB3Q12766 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC39.5■■■■□ 3.91
HMGXB3Q12766 AC068587.7-201ENST00000641602 218 ntBASIC39.5■■■■□ 3.91
HMGXB3Q12766 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC39.5■■■■□ 3.91
HMGXB3Q12766 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC39.5■■■■□ 3.91
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms