Protein–RNA interactions for Protein: Q08685

CLP1, mRNA cleavage and polyadenylation factor CLP1, yeastyeast

Predicted RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CLP1Q08685 RPG1YBR079C 2895 nt4.08□□□□□ -1.76
CLP1Q08685 PRP40YKL012W 1752 nt4.07□□□□□ -1.76
CLP1Q08685 SSL1YLR005W 1386 nt4.07□□□□□ -1.76
CLP1Q08685 YDL094CYDL094C 510 nt4.07□□□□□ -1.76
CLP1Q08685 CPR1YDR155C 489 nt4.07□□□□□ -1.76
CLP1Q08685 CNN1YFR046C 1086 nt4.07□□□□□ -1.76
CLP1Q08685 TOM20YGR082W 552 nt4.07□□□□□ -1.76
CLP1Q08685 YKL162C-AYKL162C-A 153 nt4.07□□□□□ -1.76
CLP1Q08685 RRT7YLL030C 342 nt4.07□□□□□ -1.76
CLP1Q08685 PER33YLR064W 822 nt4.07□□□□□ -1.76
CLP1Q08685 YAR030CYAR030C 342 nt4.07□□□□□ -1.76
CLP1Q08685 USA1YML029W 2517 nt4.06□□□□□ -1.76
CLP1Q08685 DHR2YKL078W 2208 nt4.06□□□□□ -1.76
CLP1Q08685 ARH1YDR376W 1482 nt4.06□□□□□ -1.76
CLP1Q08685 PDX1YGR193C 1233 nt4.06□□□□□ -1.76
CLP1Q08685 MYO3YKL129C 3819 nt4.06□□□□□ -1.76
CLP1Q08685 EOS1YNL080C 1101 nt4.06□□□□□ -1.76
CLP1Q08685 DBP3YGL078C 1572 nt4.06□□□□□ -1.76
CLP1Q08685 MMR1YLR190W 1476 nt4.05□□□□□ -1.76
CLP1Q08685 SIP1YDR422C 2448 nt4.05□□□□□ -1.76
CLP1Q08685 TCB3YML072C 4638 nt4.05□□□□□ -1.76
CLP1Q08685 BDP1YNL039W 1785 nt4.05□□□□□ -1.76
CLP1Q08685 CWC2YDL209C 1020 nt4.05□□□□□ -1.76
CLP1Q08685 EAF5YEL018W 840 nt4.05□□□□□ -1.76
CLP1Q08685 YHR032C-AYHR032C-A 120 nt4.05□□□□□ -1.76
CLP1Q08685 HEM15YOR176W 1182 nt4.05□□□□□ -1.76
CLP1Q08685 ARO7YPR060C 771 nt4.05□□□□□ -1.76
CLP1Q08685 SWI1YPL016W 3945 nt4.05□□□□□ -1.76
CLP1Q08685 HST1YOL068C 1512 nt4.05□□□□□ -1.76
CLP1Q08685 NTH1YDR001C 2256 nt4.05□□□□□ -1.76
CLP1Q08685 YBR225WYBR225W 2703 nt4.04□□□□□ -1.76
CLP1Q08685 RGP1YDR137W 1992 nt4.04□□□□□ -1.76
CLP1Q08685 SEC2YNL272C 2280 nt4.04□□□□□ -1.76
CLP1Q08685 RSF1YMR030W 1131 nt4.04□□□□□ -1.76
CLP1Q08685 SUI1YNL244C 327 nt4.04□□□□□ -1.76
CLP1Q08685 RFA2YNL312W 822 nt4.04□□□□□ -1.76
CLP1Q08685 MRPS9YBR146W 837 nt4.04□□□□□ -1.76
CLP1Q08685 DHH1YDL160C 1521 nt4.04□□□□□ -1.76
CLP1Q08685 YLR345WYLR345W 1530 nt4.04□□□□□ -1.76
CLP1Q08685 MNL1YHR204W 2391 nt4.04□□□□□ -1.76
CLP1Q08685 BRE4YDL231C 3378 nt4.03□□□□□ -1.76
CLP1Q08685 REB1YBR049C 2433 nt4.03□□□□□ -1.76
CLP1Q08685 YCR085WYCR085W 354 nt4.03□□□□□ -1.76
CLP1Q08685 LSB1YGR136W 726 nt4.03□□□□□ -1.76
CLP1Q08685 IRC9YJL142C 393 nt4.03□□□□□ -1.76
CLP1Q08685 RPC19YNL113W 429 nt4.03□□□□□ -1.76
CLP1Q08685 MMT1YMR177W 1533 nt4.03□□□□□ -1.76
CLP1Q08685 FMP25YLR077W 1752 nt4.03□□□□□ -1.76
CLP1Q08685 GLO3YER122C 1482 nt4.03□□□□□ -1.76
CLP1Q08685 BUD27YFL023W 2391 nt4.03□□□□□ -1.76
CLP1Q08685 FAR10YLR238W 1437 nt4.03□□□□□ -1.76
CLP1Q08685 ABP140YOR239W 1887 nt4.03□□□□□ -1.77
CLP1Q08685 HEF3YNL014W 3135 nt4.02□□□□□ -1.77
CLP1Q08685 CDC10YCR002C 969 nt4.02□□□□□ -1.77
CLP1Q08685 ELO2YCR034W 1044 nt4.02□□□□□ -1.77
CLP1Q08685 snR7-LsnR7-L 214 nt4.02□□□□□ -1.77
CLP1Q08685 RCR2YDR003W 633 nt4.02□□□□□ -1.77
CLP1Q08685 AHA1YDR214W 1053 nt4.02□□□□□ -1.77
CLP1Q08685 YPL025CYPL025C 558 nt4.02□□□□□ -1.77
CLP1Q08685 SCD6YPR129W 1050 nt4.02□□□□□ -1.77
CLP1Q08685 GGA1YDR358W 1674 nt4.01□□□□□ -1.77
CLP1Q08685 NOP6YDL213C 678 nt4.01□□□□□ -1.77
CLP1Q08685 IES6YEL044W 501 nt4.01□□□□□ -1.77
CLP1Q08685 YER134CYER134C 537 nt4.01□□□□□ -1.77
CLP1Q08685 SUP56tL(CAA)A 82 nt4.01□□□□□ -1.77
CLP1Q08685 SUP53tL(CAA)C 82 nt4.01□□□□□ -1.77
CLP1Q08685 tL(CAA)DtL(CAA)D 82 nt4.01□□□□□ -1.77
CLP1Q08685 tL(CAA)G1tL(CAA)G1 82 nt4.01□□□□□ -1.77
CLP1Q08685 SUP54tL(CAA)G2 82 nt4.01□□□□□ -1.77
CLP1Q08685 tL(CAA)G3tL(CAA)G3 82 nt4.01□□□□□ -1.77
CLP1Q08685 tL(CAA)KtL(CAA)K 82 nt4.01□□□□□ -1.77
CLP1Q08685 tL(CAA)LtL(CAA)L 82 nt4.01□□□□□ -1.77
CLP1Q08685 tL(CAA)MtL(CAA)M 82 nt4.01□□□□□ -1.77
CLP1Q08685 tL(CAA)NtL(CAA)N 82 nt4.01□□□□□ -1.77
CLP1Q08685 YPL162CYPL162C 822 nt4.01□□□□□ -1.77
CLP1Q08685 SLX1YBR228W 915 nt4.01□□□□□ -1.77
CLP1Q08685 ARX1YDR101C 1782 nt4.01□□□□□ -1.77
CLP1Q08685 YDR230WYDR230W 348 nt4□□□□□ -1.77
CLP1Q08685 GRE3YHR104W 984 nt4□□□□□ -1.77
CLP1Q08685 FUR1YHR128W 651 nt4□□□□□ -1.77
CLP1Q08685 YIL152WYIL152W 708 nt4□□□□□ -1.77
CLP1Q08685 FOL3YMR113W 1284 nt4□□□□□ -1.77
CLP1Q08685 PRX1YBL064C 786 nt4□□□□□ -1.77
CLP1Q08685 VID27YNL212W 2349 nt4□□□□□ -1.77
CLP1Q08685 YTM1YOR272W 1383 nt4□□□□□ -1.77
CLP1Q08685 MTC4YBR255W 2085 nt3.99□□□□□ -1.77
CLP1Q08685 TRF5YNL299W 1929 nt3.99□□□□□ -1.77
CLP1Q08685 ZRC1YMR243C 1329 nt3.99□□□□□ -1.77
CLP1Q08685 SVF1YDR346C 1446 nt3.99□□□□□ -1.77
CLP1Q08685 PHO12YHR215W 1404 nt3.99□□□□□ -1.77
CLP1Q08685 PHO11YAR071W 1404 nt3.99□□□□□ -1.77
CLP1Q08685 THI13YDL244W 1023 nt3.99□□□□□ -1.77
CLP1Q08685 YJR112W-AYJR112W-A 330 nt3.99□□□□□ -1.77
CLP1Q08685 THI11YJR156C 1023 nt3.99□□□□□ -1.77
CLP1Q08685 FLD1YLR404W 858 nt3.99□□□□□ -1.77
CLP1Q08685 SHE1YBL031W 1017 nt3.99□□□□□ -1.77
CLP1Q08685 YBR134WYBR134W 402 nt3.99□□□□□ -1.77
CLP1Q08685 UBP10YNL186W 2379 nt3.99□□□□□ -1.77
CLP1Q08685 ALE1YOR175C 1860 nt3.98□□□□□ -1.77
CLP1Q08685 RTS1YOR014W 2274 nt3.98□□□□□ -1.77
Retrieved 100 of 7,029 protein–RNA pairs in 17.3 ms