Protein–RNA interactions for Protein: Q07837

SLC3A1, Neutral and basic amino acid transport protein rBAT, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A1Q07837 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC3A1Q07837 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC3A1Q07837 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC3A1Q07837 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC3A1Q07837 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC3A1Q07837 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
SLC3A1Q07837 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.75■□□□□ 0.75
SLC3A1Q07837 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
SLC3A1Q07837 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.75■□□□□ 0.75
SLC3A1Q07837 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC3A1Q07837 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SLC3A1Q07837 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC3A1Q07837 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC3A1Q07837 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.75■□□□□ 0.75
SLC3A1Q07837 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC3A1Q07837 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.74■□□□□ 0.75
SLC3A1Q07837 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SLC3A1Q07837 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC3A1Q07837 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC3A1Q07837 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.74■□□□□ 0.75
SLC3A1Q07837 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SLC3A1Q07837 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SLC3A1Q07837 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC3A1Q07837 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC3A1Q07837 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SLC3A1Q07837 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.74■□□□□ 0.75
SLC3A1Q07837 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC3A1Q07837 AL137060.1-201ENST00000618151 2648 ntBASIC19.73■□□□□ 0.75
SLC3A1Q07837 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SLC3A1Q07837 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC3A1Q07837 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SLC3A1Q07837 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.73■□□□□ 0.75
SLC3A1Q07837 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SLC3A1Q07837 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC3A1Q07837 GUSBP5-201ENST00000418136 578 ntBASIC19.73■□□□□ 0.75
SLC3A1Q07837 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC3A1Q07837 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.73■□□□□ 0.75
SLC3A1Q07837 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SLC3A1Q07837 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC3A1Q07837 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC3A1Q07837 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.73■□□□□ 0.75
SLC3A1Q07837 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC3A1Q07837 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC3A1Q07837 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SLC3A1Q07837 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC3A1Q07837 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC3A1Q07837 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC3A1Q07837 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SLC3A1Q07837 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SLC3A1Q07837 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.72■□□□□ 0.75
SLC3A1Q07837 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.72■□□□□ 0.75
SLC3A1Q07837 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
SLC3A1Q07837 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC3A1Q07837 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC3A1Q07837 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
SLC3A1Q07837 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SLC3A1Q07837 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.72■□□□□ 0.75
SLC3A1Q07837 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.72■□□□□ 0.75
SLC3A1Q07837 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SLC3A1Q07837 MIR4787-201ENST00000607364 84 ntBASIC19.72■□□□□ 0.75
SLC3A1Q07837 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.72■□□□□ 0.75
SLC3A1Q07837 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC3A1Q07837 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SLC3A1Q07837 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SLC3A1Q07837 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
SLC3A1Q07837 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC3A1Q07837 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC3A1Q07837 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
SLC3A1Q07837 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.7■□□□□ 0.74
SLC3A1Q07837 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.7■□□□□ 0.74
SLC3A1Q07837 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SLC3A1Q07837 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SLC3A1Q07837 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SLC3A1Q07837 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC3A1Q07837 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC3A1Q07837 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SLC3A1Q07837 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
SLC3A1Q07837 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC3A1Q07837 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC3A1Q07837 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
SLC3A1Q07837 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SLC3A1Q07837 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC3A1Q07837 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC3A1Q07837 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
SLC3A1Q07837 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC3A1Q07837 AC092053.2-201ENST00000640557 1818 ntBASIC19.69■□□□□ 0.74
SLC3A1Q07837 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SLC3A1Q07837 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC3A1Q07837 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC3A1Q07837 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.69■□□□□ 0.74
SLC3A1Q07837 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC3A1Q07837 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
SLC3A1Q07837 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.69■□□□□ 0.74
SLC3A1Q07837 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.69■□□□□ 0.74
SLC3A1Q07837 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.69■□□□□ 0.74
SLC3A1Q07837 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC3A1Q07837 AC139530.1-201ENST00000575312 1977 ntBASIC19.69■□□□□ 0.74
SLC3A1Q07837 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC3A1Q07837 C11orf96-202ENST00000528572 1834 ntBASIC19.69■□□□□ 0.74
SLC3A1Q07837 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms