Protein–RNA interactions for Protein: Q02985

CFHR3, Complement factor H-related protein 3, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3Q02985 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CFHR3Q02985 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CFHR3Q02985 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CFHR3Q02985 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CFHR3Q02985 HYI-206ENST00000372434 1025 ntTSL 5 BASIC17.26■□□□□ 0.35
CFHR3Q02985 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CFHR3Q02985 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CFHR3Q02985 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC17.26■□□□□ 0.35
CFHR3Q02985 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
CFHR3Q02985 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CFHR3Q02985 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CFHR3Q02985 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CFHR3Q02985 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CFHR3Q02985 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CFHR3Q02985 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC17.25■□□□□ 0.35
CFHR3Q02985 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CFHR3Q02985 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CFHR3Q02985 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC17.25■□□□□ 0.35
CFHR3Q02985 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
CFHR3Q02985 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC17.25■□□□□ 0.35
CFHR3Q02985 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CFHR3Q02985 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC17.25■□□□□ 0.35
CFHR3Q02985 AC105265.2-201ENST00000467189 838 ntBASIC17.25■□□□□ 0.35
CFHR3Q02985 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC17.25■□□□□ 0.35
CFHR3Q02985 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC17.25■□□□□ 0.35
CFHR3Q02985 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CFHR3Q02985 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CFHR3Q02985 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC17.25■□□□□ 0.35
CFHR3Q02985 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CFHR3Q02985 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
CFHR3Q02985 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC17.24■□□□□ 0.35
CFHR3Q02985 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CFHR3Q02985 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC17.24■□□□□ 0.35
CFHR3Q02985 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CFHR3Q02985 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CFHR3Q02985 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CFHR3Q02985 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CFHR3Q02985 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CFHR3Q02985 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CFHR3Q02985 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CFHR3Q02985 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC17.24■□□□□ 0.35
CFHR3Q02985 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CFHR3Q02985 PKM-204ENST00000449901 2526 ntTSL 2 BASIC17.24■□□□□ 0.35
CFHR3Q02985 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC17.24■□□□□ 0.35
CFHR3Q02985 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CFHR3Q02985 NFE2L3P1-201ENST00000588207 1959 ntBASIC17.24■□□□□ 0.35
CFHR3Q02985 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
CFHR3Q02985 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CFHR3Q02985 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CFHR3Q02985 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CFHR3Q02985 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
CFHR3Q02985 GRAMD4P2-201ENST00000423297 1097 ntBASIC17.23■□□□□ 0.35
CFHR3Q02985 ZNRF2P3-201ENST00000424200 374 ntBASIC17.23■□□□□ 0.35
CFHR3Q02985 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CFHR3Q02985 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC17.23■□□□□ 0.35
CFHR3Q02985 AP005435.1-201ENST00000529293 1178 ntBASIC17.23■□□□□ 0.35
CFHR3Q02985 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CFHR3Q02985 AC126544.1-201ENST00000580842 1059 ntBASIC17.23■□□□□ 0.35
CFHR3Q02985 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CFHR3Q02985 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC17.23■□□□□ 0.35
CFHR3Q02985 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CFHR3Q02985 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC17.23■□□□□ 0.35
CFHR3Q02985 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CFHR3Q02985 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC17.23■□□□□ 0.35
CFHR3Q02985 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC17.23■□□□□ 0.35
CFHR3Q02985 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CFHR3Q02985 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CFHR3Q02985 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
CFHR3Q02985 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CFHR3Q02985 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC17.22■□□□□ 0.35
CFHR3Q02985 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC17.22■□□□□ 0.35
CFHR3Q02985 IGHV3-19-201ENST00000521488 291 ntBASIC17.22■□□□□ 0.35
CFHR3Q02985 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CFHR3Q02985 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC17.22■□□□□ 0.35
CFHR3Q02985 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CFHR3Q02985 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC17.22■□□□□ 0.35
CFHR3Q02985 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CFHR3Q02985 AL031602.1-201ENST00000633169 911 ntBASIC17.22■□□□□ 0.35
CFHR3Q02985 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC17.22■□□□□ 0.35
CFHR3Q02985 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CFHR3Q02985 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
CFHR3Q02985 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CFHR3Q02985 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC17.21■□□□□ 0.35
CFHR3Q02985 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CFHR3Q02985 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC17.21■□□□□ 0.35
CFHR3Q02985 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
CFHR3Q02985 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC17.21■□□□□ 0.35
CFHR3Q02985 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC17.21■□□□□ 0.35
CFHR3Q02985 STOX2-205ENST00000513034 807 ntTSL 3 BASIC17.21■□□□□ 0.35
CFHR3Q02985 AICDA-202ENST00000537228 667 ntTSL 5 BASIC17.21■□□□□ 0.35
CFHR3Q02985 DUSP8P5-201ENST00000422884 1815 ntBASIC17.21■□□□□ 0.35
CFHR3Q02985 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CFHR3Q02985 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC17.2■□□□□ 0.34
CFHR3Q02985 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CFHR3Q02985 GUK1-205ENST00000366722 850 ntTSL 3 BASIC17.2■□□□□ 0.34
CFHR3Q02985 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC17.2■□□□□ 0.34
CFHR3Q02985 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CFHR3Q02985 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC17.2■□□□□ 0.34
CFHR3Q02985 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CFHR3Q02985 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms