Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
H3F3AP84243 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.75■□□□□ 0.75
H3F3AP84243 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
H3F3AP84243 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
H3F3AP84243 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
H3F3AP84243 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
H3F3AP84243 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
H3F3AP84243 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.75■□□□□ 0.75
H3F3AP84243 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
H3F3AP84243 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
H3F3AP84243 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
H3F3AP84243 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
H3F3AP84243 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
H3F3AP84243 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
H3F3AP84243 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.74■□□□□ 0.75
H3F3AP84243 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
H3F3AP84243 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.74■□□□□ 0.75
H3F3AP84243 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
H3F3AP84243 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.74■□□□□ 0.75
H3F3AP84243 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
H3F3AP84243 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.74■□□□□ 0.75
H3F3AP84243 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.74■□□□□ 0.75
H3F3AP84243 AL136162.1-201ENST00000607711 1078 ntBASIC19.74■□□□□ 0.75
H3F3AP84243 AC110285.6-201ENST00000617652 491 ntBASIC19.74■□□□□ 0.75
H3F3AP84243 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.74■□□□□ 0.75
H3F3AP84243 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
H3F3AP84243 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
H3F3AP84243 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
H3F3AP84243 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.74■□□□□ 0.75
H3F3AP84243 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
H3F3AP84243 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
H3F3AP84243 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
H3F3AP84243 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
H3F3AP84243 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
H3F3AP84243 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
H3F3AP84243 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
H3F3AP84243 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.73■□□□□ 0.75
H3F3AP84243 AC024257.2-201ENST00000549699 147 ntBASIC19.73■□□□□ 0.75
H3F3AP84243 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.73■□□□□ 0.75
H3F3AP84243 AC106739.1-201ENST00000617035 715 ntBASIC19.73■□□□□ 0.75
H3F3AP84243 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
H3F3AP84243 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.73■□□□□ 0.75
H3F3AP84243 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
H3F3AP84243 AC135279.3-201ENST00000610945 1311 ntBASIC19.73■□□□□ 0.75
H3F3AP84243 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.73■□□□□ 0.75
H3F3AP84243 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.73■□□□□ 0.75
H3F3AP84243 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.72■□□□□ 0.75
H3F3AP84243 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.72■□□□□ 0.75
H3F3AP84243 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
H3F3AP84243 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
H3F3AP84243 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.72■□□□□ 0.75
H3F3AP84243 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
H3F3AP84243 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.72■□□□□ 0.75
H3F3AP84243 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
H3F3AP84243 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
H3F3AP84243 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.72■□□□□ 0.75
H3F3AP84243 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.72■□□□□ 0.75
H3F3AP84243 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
H3F3AP84243 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
H3F3AP84243 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.72■□□□□ 0.75
H3F3AP84243 AC068473.5-201ENST00000616428 2072 ntBASIC19.72■□□□□ 0.75
H3F3AP84243 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
H3F3AP84243 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
H3F3AP84243 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.72■□□□□ 0.75
H3F3AP84243 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
H3F3AP84243 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.71■□□□□ 0.75
H3F3AP84243 OR2I1P-207ENST00000453522 948 ntBASIC19.71■□□□□ 0.75
H3F3AP84243 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
H3F3AP84243 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
H3F3AP84243 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
H3F3AP84243 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
H3F3AP84243 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
H3F3AP84243 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
H3F3AP84243 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.71■□□□□ 0.75
H3F3AP84243 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
H3F3AP84243 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
H3F3AP84243 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
H3F3AP84243 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
H3F3AP84243 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
H3F3AP84243 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
H3F3AP84243 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.7■□□□□ 0.74
H3F3AP84243 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.7■□□□□ 0.74
H3F3AP84243 AL139246.5-201ENST00000606645 996 ntBASIC19.7■□□□□ 0.74
H3F3AP84243 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.7■□□□□ 0.74
H3F3AP84243 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
H3F3AP84243 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
H3F3AP84243 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
H3F3AP84243 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
H3F3AP84243 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
H3F3AP84243 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.7■□□□□ 0.74
H3F3AP84243 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
H3F3AP84243 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
H3F3AP84243 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
H3F3AP84243 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
H3F3AP84243 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.69■□□□□ 0.74
H3F3AP84243 PBX2P1-201ENST00000493219 1291 ntBASIC19.69■□□□□ 0.74
H3F3AP84243 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.69■□□□□ 0.74
H3F3AP84243 AC133561.4-201ENST00000566112 224 ntBASIC19.69■□□□□ 0.74
H3F3AP84243 MIR4767-201ENST00000582827 78 ntBASIC19.69■□□□□ 0.74
H3F3AP84243 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms