Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 AP004607.4-201ENST00000530158 1459 ntBASIC26.61■■□□□ 1.85
CNTNAP1P78357 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
CNTNAP1P78357 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
CNTNAP1P78357 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CNTNAP1P78357 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
CNTNAP1P78357 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC26.61■■□□□ 1.85
CNTNAP1P78357 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC26.6■■□□□ 1.85
CNTNAP1P78357 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC26.6■■□□□ 1.85
CNTNAP1P78357 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
CNTNAP1P78357 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CNTNAP1P78357 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CNTNAP1P78357 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC26.6■■□□□ 1.85
CNTNAP1P78357 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CNTNAP1P78357 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CNTNAP1P78357 FP325331.1-202ENST00000623531 1380 ntBASIC26.59■■□□□ 1.85
CNTNAP1P78357 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
CNTNAP1P78357 COX20-201ENST00000366528 568 ntTSL 2 BASIC26.59■■□□□ 1.85
CNTNAP1P78357 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
CNTNAP1P78357 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC26.59■■□□□ 1.85
CNTNAP1P78357 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC26.59■■□□□ 1.85
CNTNAP1P78357 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC26.59■■□□□ 1.85
CNTNAP1P78357 AC011767.1-201ENST00000617410 1153 ntBASIC26.59■■□□□ 1.85
CNTNAP1P78357 AC087239.1-201ENST00000622671 572 ntBASIC26.59■■□□□ 1.85
CNTNAP1P78357 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
CNTNAP1P78357 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC26.59■■□□□ 1.85
CNTNAP1P78357 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
CNTNAP1P78357 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
CNTNAP1P78357 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
CNTNAP1P78357 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
CNTNAP1P78357 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CNTNAP1P78357 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CNTNAP1P78357 AC004854.2-201ENST00000608450 1441 ntBASIC26.58■■□□□ 1.85
CNTNAP1P78357 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC26.58■■□□□ 1.85
CNTNAP1P78357 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC26.58■■□□□ 1.84
CNTNAP1P78357 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
CNTNAP1P78357 TSPY6P-201ENST00000448518 926 ntBASIC26.58■■□□□ 1.84
CNTNAP1P78357 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC26.58■■□□□ 1.84
CNTNAP1P78357 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC26.58■■□□□ 1.84
CNTNAP1P78357 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
CNTNAP1P78357 AL121832.2-201ENST00000610979 668 ntBASIC26.58■■□□□ 1.84
CNTNAP1P78357 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
CNTNAP1P78357 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC26.57■■□□□ 1.84
CNTNAP1P78357 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC26.57■■□□□ 1.84
CNTNAP1P78357 AC138932.3-201ENST00000567634 1902 ntBASIC26.57■■□□□ 1.84
CNTNAP1P78357 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CNTNAP1P78357 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CNTNAP1P78357 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC26.57■■□□□ 1.84
CNTNAP1P78357 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CNTNAP1P78357 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC26.57■■□□□ 1.84
CNTNAP1P78357 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
CNTNAP1P78357 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
CNTNAP1P78357 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
CNTNAP1P78357 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC26.57■■□□□ 1.84
CNTNAP1P78357 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC26.57■■□□□ 1.84
CNTNAP1P78357 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CNTNAP1P78357 MDK-213ENST00000617138 635 ntTSL 2 BASIC26.57■■□□□ 1.84
CNTNAP1P78357 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CNTNAP1P78357 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CNTNAP1P78357 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
CNTNAP1P78357 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC26.56■■□□□ 1.84
CNTNAP1P78357 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
CNTNAP1P78357 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC26.56■■□□□ 1.84
CNTNAP1P78357 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC26.56■■□□□ 1.84
CNTNAP1P78357 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
CNTNAP1P78357 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC26.56■■□□□ 1.84
CNTNAP1P78357 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC26.56■■□□□ 1.84
CNTNAP1P78357 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
CNTNAP1P78357 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC26.56■■□□□ 1.84
CNTNAP1P78357 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
CNTNAP1P78357 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CNTNAP1P78357 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CNTNAP1P78357 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC26.55■■□□□ 1.84
CNTNAP1P78357 GUSBP6-202ENST00000438529 1198 ntBASIC26.55■■□□□ 1.84
CNTNAP1P78357 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC26.55■■□□□ 1.84
CNTNAP1P78357 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC26.55■■□□□ 1.84
CNTNAP1P78357 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC26.55■■□□□ 1.84
CNTNAP1P78357 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
CNTNAP1P78357 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC26.54■■□□□ 1.84
CNTNAP1P78357 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC26.54■■□□□ 1.84
CNTNAP1P78357 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CNTNAP1P78357 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CNTNAP1P78357 AC069152.1-201ENST00000438030 544 ntBASIC26.54■■□□□ 1.84
CNTNAP1P78357 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC26.54■■□□□ 1.84
CNTNAP1P78357 AC105233.4-201ENST00000642045 216 ntBASIC26.54■■□□□ 1.84
CNTNAP1P78357 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CNTNAP1P78357 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
CNTNAP1P78357 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC26.54■■□□□ 1.84
CNTNAP1P78357 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC26.54■■□□□ 1.84
CNTNAP1P78357 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CNTNAP1P78357 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
CNTNAP1P78357 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CNTNAP1P78357 MED17-227ENST00000640521 2047 ntTSL 5 BASIC26.53■■□□□ 1.84
CNTNAP1P78357 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
CNTNAP1P78357 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
CNTNAP1P78357 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
CNTNAP1P78357 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC26.53■■□□□ 1.84
CNTNAP1P78357 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC26.53■■□□□ 1.84
CNTNAP1P78357 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CNTNAP1P78357 AL050303.2-201ENST00000619798 666 ntBASIC26.53■■□□□ 1.84
CNTNAP1P78357 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms