Protein–RNA interactions for Protein: P78324

SIRPA, Tyrosine-protein phosphatase non-receptor type substrate 1, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPAP78324 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.05■□□□□ 0.8
SIRPAP78324 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.05■□□□□ 0.8
SIRPAP78324 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.05■□□□□ 0.8
SIRPAP78324 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.04■□□□□ 0.8
SIRPAP78324 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SIRPAP78324 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SIRPAP78324 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
SIRPAP78324 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SIRPAP78324 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SIRPAP78324 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.04■□□□□ 0.8
SIRPAP78324 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SIRPAP78324 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
SIRPAP78324 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SIRPAP78324 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.04■□□□□ 0.8
SIRPAP78324 LINC00565-201ENST00000562710 2331 ntBASIC20.04■□□□□ 0.8
SIRPAP78324 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SIRPAP78324 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SIRPAP78324 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SIRPAP78324 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SIRPAP78324 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SIRPAP78324 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SIRPAP78324 SERBP1P1-201ENST00000396021 1160 ntBASIC20.03■□□□□ 0.8
SIRPAP78324 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.03■□□□□ 0.8
SIRPAP78324 AC142381.2-201ENST00000566120 298 ntBASIC20.03■□□□□ 0.8
SIRPAP78324 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.03■□□□□ 0.8
SIRPAP78324 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SIRPAP78324 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SIRPAP78324 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
SIRPAP78324 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SIRPAP78324 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
SIRPAP78324 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SIRPAP78324 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.02■□□□□ 0.8
SIRPAP78324 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SIRPAP78324 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.02■□□□□ 0.8
SIRPAP78324 AC006455.2-201ENST00000429931 906 ntBASIC20.02■□□□□ 0.8
SIRPAP78324 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.02■□□□□ 0.8
SIRPAP78324 AC009086.3-201ENST00000623486 1008 ntBASIC20.02■□□□□ 0.8
SIRPAP78324 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SIRPAP78324 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
SIRPAP78324 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SIRPAP78324 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.01■□□□□ 0.79
SIRPAP78324 GUSBP5-202ENST00000510805 1989 ntBASIC20.01■□□□□ 0.79
SIRPAP78324 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SIRPAP78324 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SIRPAP78324 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SIRPAP78324 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
SIRPAP78324 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.01■□□□□ 0.79
SIRPAP78324 AC133561.4-201ENST00000566112 224 ntBASIC20.01■□□□□ 0.79
SIRPAP78324 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
SIRPAP78324 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SIRPAP78324 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SIRPAP78324 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SIRPAP78324 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
SIRPAP78324 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20■□□□□ 0.79
SIRPAP78324 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20■□□□□ 0.79
SIRPAP78324 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20■□□□□ 0.79
SIRPAP78324 AC241377.3-202ENST00000626088 1088 ntBASIC20■□□□□ 0.79
SIRPAP78324 AC241585.3-202ENST00000628937 1088 ntBASIC20■□□□□ 0.79
SIRPAP78324 AC245100.8-202ENST00000629247 1058 ntBASIC20■□□□□ 0.79
SIRPAP78324 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20■□□□□ 0.79
SIRPAP78324 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SIRPAP78324 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
SIRPAP78324 LINC00526-201ENST00000581067 1875 ntBASIC20■□□□□ 0.79
SIRPAP78324 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SIRPAP78324 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SIRPAP78324 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
SIRPAP78324 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SIRPAP78324 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SIRPAP78324 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SIRPAP78324 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SIRPAP78324 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SIRPAP78324 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.99■□□□□ 0.79
SIRPAP78324 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SIRPAP78324 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
SIRPAP78324 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SIRPAP78324 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SIRPAP78324 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SIRPAP78324 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SIRPAP78324 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SIRPAP78324 MIR935-201ENST00000401179 91 ntBASIC19.98■□□□□ 0.79
SIRPAP78324 MIR4767-201ENST00000582827 78 ntBASIC19.98■□□□□ 0.79
SIRPAP78324 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.98■□□□□ 0.79
SIRPAP78324 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.98■□□□□ 0.79
SIRPAP78324 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.98■□□□□ 0.79
SIRPAP78324 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
SIRPAP78324 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
SIRPAP78324 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SIRPAP78324 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SIRPAP78324 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SIRPAP78324 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.98■□□□□ 0.79
SIRPAP78324 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SIRPAP78324 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SIRPAP78324 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
SIRPAP78324 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SIRPAP78324 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.97■□□□□ 0.79
SIRPAP78324 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SIRPAP78324 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.97■□□□□ 0.79
SIRPAP78324 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SIRPAP78324 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SIRPAP78324 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms