Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC17.86■□□□□ 0.45
SPCS3P61009 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC17.86■□□□□ 0.45
SPCS3P61009 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SPCS3P61009 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SPCS3P61009 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SPCS3P61009 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SPCS3P61009 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SPCS3P61009 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC17.86■□□□□ 0.45
SPCS3P61009 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
SPCS3P61009 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC17.86■□□□□ 0.45
SPCS3P61009 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
SPCS3P61009 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SPCS3P61009 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SPCS3P61009 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
SPCS3P61009 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SPCS3P61009 AC092053.2-201ENST00000640557 1818 ntBASIC17.86■□□□□ 0.45
SPCS3P61009 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SPCS3P61009 WWC2-AS2-201ENST00000578387 2183 ntBASIC17.86■□□□□ 0.45
SPCS3P61009 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
SPCS3P61009 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SPCS3P61009 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SPCS3P61009 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SPCS3P61009 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.85■□□□□ 0.45
SPCS3P61009 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SPCS3P61009 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SPCS3P61009 NTF6A-201ENST00000591175 560 ntBASIC17.85■□□□□ 0.45
SPCS3P61009 PALM-208ENST00000592155 2272 ntTSL 4 BASIC17.85■□□□□ 0.45
SPCS3P61009 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
SPCS3P61009 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SPCS3P61009 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SPCS3P61009 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SPCS3P61009 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SPCS3P61009 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SPCS3P61009 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SPCS3P61009 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SPCS3P61009 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
SPCS3P61009 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SPCS3P61009 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC17.84■□□□□ 0.45
SPCS3P61009 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SPCS3P61009 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SPCS3P61009 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC17.84■□□□□ 0.45
SPCS3P61009 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC17.84■□□□□ 0.45
SPCS3P61009 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC17.84■□□□□ 0.45
SPCS3P61009 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SPCS3P61009 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC17.84■□□□□ 0.45
SPCS3P61009 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SPCS3P61009 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SPCS3P61009 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SPCS3P61009 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SPCS3P61009 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.83■□□□□ 0.45
SPCS3P61009 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SPCS3P61009 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC17.83■□□□□ 0.44
SPCS3P61009 ABHD17AP5-201ENST00000580133 923 ntBASIC17.83■□□□□ 0.44
SPCS3P61009 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
SPCS3P61009 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SPCS3P61009 AL391422.3-201ENST00000603791 2761 ntBASIC17.83■□□□□ 0.44
SPCS3P61009 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SPCS3P61009 AC139530.1-201ENST00000575312 1977 ntBASIC17.82■□□□□ 0.44
SPCS3P61009 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
SPCS3P61009 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SPCS3P61009 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SPCS3P61009 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SPCS3P61009 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SPCS3P61009 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SPCS3P61009 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
SPCS3P61009 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SPCS3P61009 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC17.82■□□□□ 0.44
SPCS3P61009 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SPCS3P61009 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC17.82■□□□□ 0.44
SPCS3P61009 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC17.82■□□□□ 0.44
SPCS3P61009 AC144652.1-201ENST00000609974 1624 ntBASIC17.82■□□□□ 0.44
SPCS3P61009 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SPCS3P61009 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SPCS3P61009 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SPCS3P61009 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC17.82■□□□□ 0.44
SPCS3P61009 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SPCS3P61009 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SPCS3P61009 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
SPCS3P61009 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
SPCS3P61009 C11orf96-202ENST00000528572 1834 ntBASIC17.82■□□□□ 0.44
SPCS3P61009 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
SPCS3P61009 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
SPCS3P61009 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SPCS3P61009 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SPCS3P61009 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC17.81■□□□□ 0.44
SPCS3P61009 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SPCS3P61009 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
SPCS3P61009 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SPCS3P61009 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SPCS3P61009 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SPCS3P61009 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
SPCS3P61009 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC17.81■□□□□ 0.44
SPCS3P61009 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SPCS3P61009 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SPCS3P61009 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SPCS3P61009 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
SPCS3P61009 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SPCS3P61009 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
SPCS3P61009 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SPCS3P61009 REST-206ENST00000612429 1376 ntTSL 5 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms