Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
CLDN8P56748 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CLDN8P56748 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLDN8P56748 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CLDN8P56748 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLDN8P56748 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CLDN8P56748 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
CLDN8P56748 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLDN8P56748 AC009102.2-201ENST00000606772 1639 ntBASIC21.01■□□□□ 0.95
CLDN8P56748 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.01■□□□□ 0.95
CLDN8P56748 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLDN8P56748 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLDN8P56748 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CLDN8P56748 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLDN8P56748 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLDN8P56748 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLDN8P56748 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CLDN8P56748 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.01■□□□□ 0.95
CLDN8P56748 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLDN8P56748 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
CLDN8P56748 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CLDN8P56748 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21■□□□□ 0.95
CLDN8P56748 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21■□□□□ 0.95
CLDN8P56748 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CLDN8P56748 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
CLDN8P56748 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC21■□□□□ 0.95
CLDN8P56748 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21■□□□□ 0.95
CLDN8P56748 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21■□□□□ 0.95
CLDN8P56748 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21■□□□□ 0.95
CLDN8P56748 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21■□□□□ 0.95
CLDN8P56748 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CLDN8P56748 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21■□□□□ 0.95
CLDN8P56748 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLDN8P56748 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLDN8P56748 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLDN8P56748 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.99■□□□□ 0.95
CLDN8P56748 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLDN8P56748 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CLDN8P56748 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
CLDN8P56748 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLDN8P56748 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.99■□□□□ 0.95
CLDN8P56748 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLDN8P56748 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CLDN8P56748 MTDHP2-201ENST00000601468 714 ntBASIC20.99■□□□□ 0.95
CLDN8P56748 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.99■□□□□ 0.95
CLDN8P56748 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLDN8P56748 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLDN8P56748 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CLDN8P56748 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CLDN8P56748 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLDN8P56748 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.99■□□□□ 0.95
CLDN8P56748 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.99■□□□□ 0.95
CLDN8P56748 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
CLDN8P56748 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.98■□□□□ 0.95
CLDN8P56748 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CLDN8P56748 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CLDN8P56748 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.98■□□□□ 0.95
CLDN8P56748 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CLDN8P56748 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.98■□□□□ 0.95
CLDN8P56748 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.98■□□□□ 0.95
CLDN8P56748 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CLDN8P56748 MIR4787-201ENST00000607364 84 ntBASIC20.98■□□□□ 0.95
CLDN8P56748 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.98■□□□□ 0.95
CLDN8P56748 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
CLDN8P56748 LINC01960-201ENST00000563759 1884 ntBASIC20.98■□□□□ 0.95
CLDN8P56748 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.98■□□□□ 0.95
CLDN8P56748 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLDN8P56748 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLDN8P56748 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLDN8P56748 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.97■□□□□ 0.95
CLDN8P56748 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.97■□□□□ 0.95
CLDN8P56748 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLDN8P56748 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
CLDN8P56748 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLDN8P56748 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLDN8P56748 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.96■□□□□ 0.95
CLDN8P56748 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.96■□□□□ 0.95
CLDN8P56748 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CLDN8P56748 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLDN8P56748 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.96■□□□□ 0.95
CLDN8P56748 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.96■□□□□ 0.95
CLDN8P56748 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.96■□□□□ 0.95
CLDN8P56748 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.96■□□□□ 0.95
CLDN8P56748 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.96■□□□□ 0.95
CLDN8P56748 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLDN8P56748 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CLDN8P56748 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLDN8P56748 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLDN8P56748 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLDN8P56748 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CLDN8P56748 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CLDN8P56748 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLDN8P56748 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLDN8P56748 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CLDN8P56748 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.95■□□□□ 0.94
CLDN8P56748 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLDN8P56748 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLDN8P56748 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.94■□□□□ 0.94
CLDN8P56748 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.94■□□□□ 0.94
CLDN8P56748 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms