Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC24.36■■□□□ 1.49
PEX3P56589 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
PEX3P56589 C9orf163-202ENST00000624034 2573 ntBASIC24.36■■□□□ 1.49
PEX3P56589 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
PEX3P56589 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
PEX3P56589 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC24.35■■□□□ 1.49
PEX3P56589 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
PEX3P56589 STX4-202ENST00000394998 1498 ntTSL 2 BASIC24.35■■□□□ 1.49
PEX3P56589 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PEX3P56589 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
PEX3P56589 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC24.35■■□□□ 1.49
PEX3P56589 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC24.35■■□□□ 1.49
PEX3P56589 AC233992.3-201ENST00000607491 485 ntBASIC24.35■■□□□ 1.49
PEX3P56589 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC24.35■■□□□ 1.49
PEX3P56589 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC24.35■■□□□ 1.49
PEX3P56589 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
PEX3P56589 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC24.34■■□□□ 1.49
PEX3P56589 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC24.34■■□□□ 1.49
PEX3P56589 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PEX3P56589 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
PEX3P56589 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PEX3P56589 AC099791.1-201ENST00000416440 715 ntBASIC24.34■■□□□ 1.49
PEX3P56589 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
PEX3P56589 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC24.34■■□□□ 1.49
PEX3P56589 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
PEX3P56589 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PEX3P56589 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
PEX3P56589 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC24.33■■□□□ 1.49
PEX3P56589 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
PEX3P56589 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
PEX3P56589 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
PEX3P56589 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC24.33■■□□□ 1.49
PEX3P56589 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
PEX3P56589 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
PEX3P56589 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC24.33■■□□□ 1.49
PEX3P56589 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
PEX3P56589 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
PEX3P56589 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
PEX3P56589 AC027682.1-201ENST00000562846 899 ntBASIC24.33■■□□□ 1.49
PEX3P56589 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
PEX3P56589 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
PEX3P56589 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC24.33■■□□□ 1.49
PEX3P56589 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC24.33■■□□□ 1.49
PEX3P56589 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.48
PEX3P56589 ME2-208ENST00000638937 2471 ntTSL 5 BASIC24.33■■□□□ 1.48
PEX3P56589 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC24.32■■□□□ 1.48
PEX3P56589 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
PEX3P56589 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PEX3P56589 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC24.32■■□□□ 1.48
PEX3P56589 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
PEX3P56589 AC091305.1-201ENST00000479476 895 ntBASIC24.32■■□□□ 1.48
PEX3P56589 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
PEX3P56589 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
PEX3P56589 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PEX3P56589 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC24.32■■□□□ 1.48
PEX3P56589 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PEX3P56589 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC24.32■■□□□ 1.48
PEX3P56589 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC24.32■■□□□ 1.48
PEX3P56589 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PEX3P56589 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
PEX3P56589 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
PEX3P56589 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PEX3P56589 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
PEX3P56589 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PEX3P56589 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC24.31■■□□□ 1.48
PEX3P56589 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
PEX3P56589 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC24.31■■□□□ 1.48
PEX3P56589 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PEX3P56589 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
PEX3P56589 RASA4CP-201ENST00000424092 1398 ntBASIC24.3■■□□□ 1.48
PEX3P56589 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC24.3■■□□□ 1.48
PEX3P56589 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC24.3■■□□□ 1.48
PEX3P56589 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC24.3■■□□□ 1.48
PEX3P56589 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC24.3■■□□□ 1.48
PEX3P56589 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC24.3■■□□□ 1.48
PEX3P56589 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC24.3■■□□□ 1.48
PEX3P56589 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC24.3■■□□□ 1.48
PEX3P56589 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC24.29■■□□□ 1.48
PEX3P56589 RARA-203ENST00000394086 2008 ntTSL 2 BASIC24.29■■□□□ 1.48
PEX3P56589 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC24.29■■□□□ 1.48
PEX3P56589 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
PEX3P56589 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC24.29■■□□□ 1.48
PEX3P56589 CA15P2-201ENST00000611168 834 ntBASIC24.29■■□□□ 1.48
PEX3P56589 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PEX3P56589 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC24.28■■□□□ 1.48
PEX3P56589 HYI-206ENST00000372434 1025 ntTSL 5 BASIC24.28■■□□□ 1.48
PEX3P56589 AC126544.1-201ENST00000580842 1059 ntBASIC24.28■■□□□ 1.48
PEX3P56589 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
PEX3P56589 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC24.28■■□□□ 1.48
PEX3P56589 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC24.28■■□□□ 1.48
PEX3P56589 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
PEX3P56589 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
PEX3P56589 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC24.28■■□□□ 1.48
PEX3P56589 GCA-201ENST00000233612 1694 ntTSL 2 BASIC24.27■■□□□ 1.48
PEX3P56589 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC24.27■■□□□ 1.48
PEX3P56589 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PEX3P56589 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PEX3P56589 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
PEX3P56589 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC24.27■■□□□ 1.48
PEX3P56589 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC24.27■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms