Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.86■□□□□ 0.77
GFRA1P56159 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
GFRA1P56159 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
GFRA1P56159 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
GFRA1P56159 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.85■□□□□ 0.77
GFRA1P56159 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.85■□□□□ 0.77
GFRA1P56159 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.85■□□□□ 0.77
GFRA1P56159 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.85■□□□□ 0.77
GFRA1P56159 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
GFRA1P56159 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
GFRA1P56159 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
GFRA1P56159 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
GFRA1P56159 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
GFRA1P56159 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
GFRA1P56159 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
GFRA1P56159 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.84■□□□□ 0.77
GFRA1P56159 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.84■□□□□ 0.77
GFRA1P56159 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
GFRA1P56159 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
GFRA1P56159 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
GFRA1P56159 AL031602.1-201ENST00000633169 911 ntBASIC19.83■□□□□ 0.77
GFRA1P56159 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
GFRA1P56159 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
GFRA1P56159 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
GFRA1P56159 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
GFRA1P56159 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
GFRA1P56159 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
GFRA1P56159 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
GFRA1P56159 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.82■□□□□ 0.76
GFRA1P56159 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.82■□□□□ 0.76
GFRA1P56159 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
GFRA1P56159 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
GFRA1P56159 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
GFRA1P56159 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
GFRA1P56159 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.82■□□□□ 0.76
GFRA1P56159 AC068587.7-201ENST00000641602 218 ntBASIC19.82■□□□□ 0.76
GFRA1P56159 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
GFRA1P56159 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
GFRA1P56159 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
GFRA1P56159 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.82■□□□□ 0.76
GFRA1P56159 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.82■□□□□ 0.76
GFRA1P56159 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
GFRA1P56159 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.81■□□□□ 0.76
GFRA1P56159 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GFRA1P56159 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.81■□□□□ 0.76
GFRA1P56159 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
GFRA1P56159 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GFRA1P56159 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
GFRA1P56159 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GFRA1P56159 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
GFRA1P56159 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.81■□□□□ 0.76
GFRA1P56159 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
GFRA1P56159 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
GFRA1P56159 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.81■□□□□ 0.76
GFRA1P56159 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.81■□□□□ 0.76
GFRA1P56159 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
GFRA1P56159 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
GFRA1P56159 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GFRA1P56159 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.81■□□□□ 0.76
GFRA1P56159 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.81■□□□□ 0.76
GFRA1P56159 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.81■□□□□ 0.76
GFRA1P56159 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.81■□□□□ 0.76
GFRA1P56159 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GFRA1P56159 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
GFRA1P56159 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
GFRA1P56159 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
GFRA1P56159 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GFRA1P56159 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
GFRA1P56159 MIR572-201ENST00000384983 95 ntBASIC19.8■□□□□ 0.76
GFRA1P56159 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
GFRA1P56159 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
GFRA1P56159 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GFRA1P56159 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.8■□□□□ 0.76
GFRA1P56159 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GFRA1P56159 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.79■□□□□ 0.76
GFRA1P56159 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.79■□□□□ 0.76
GFRA1P56159 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.79■□□□□ 0.76
GFRA1P56159 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.79■□□□□ 0.76
GFRA1P56159 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GFRA1P56159 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.79■□□□□ 0.76
GFRA1P56159 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
GFRA1P56159 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.79■□□□□ 0.76
GFRA1P56159 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.79■□□□□ 0.76
GFRA1P56159 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GFRA1P56159 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.79■□□□□ 0.76
GFRA1P56159 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.79■□□□□ 0.76
GFRA1P56159 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.79■□□□□ 0.76
GFRA1P56159 RARRES2P6-201ENST00000567333 442 ntBASIC19.79■□□□□ 0.76
GFRA1P56159 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
GFRA1P56159 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GFRA1P56159 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.78■□□□□ 0.76
GFRA1P56159 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
GFRA1P56159 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
GFRA1P56159 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
GFRA1P56159 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.78■□□□□ 0.76
GFRA1P56159 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
GFRA1P56159 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.78■□□□□ 0.76
GFRA1P56159 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GFRA1P56159 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GFRA1P56159 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms