Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AC135279.3-201ENST00000610945 1311 ntBASIC20.02■□□□□ 0.8
SUMO3P55854 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
SUMO3P55854 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
SUMO3P55854 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SUMO3P55854 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SUMO3P55854 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
SUMO3P55854 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SUMO3P55854 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SUMO3P55854 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.02■□□□□ 0.8
SUMO3P55854 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.02■□□□□ 0.8
SUMO3P55854 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.02■□□□□ 0.8
SUMO3P55854 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.02■□□□□ 0.8
SUMO3P55854 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SUMO3P55854 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SUMO3P55854 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
SUMO3P55854 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SUMO3P55854 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.02■□□□□ 0.79
SUMO3P55854 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.02■□□□□ 0.79
SUMO3P55854 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.02■□□□□ 0.79
SUMO3P55854 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.79
SUMO3P55854 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SUMO3P55854 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SUMO3P55854 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
SUMO3P55854 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SUMO3P55854 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SUMO3P55854 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.01■□□□□ 0.79
SUMO3P55854 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
SUMO3P55854 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
SUMO3P55854 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SUMO3P55854 AC096631.2-201ENST00000436136 790 ntBASIC20.01■□□□□ 0.79
SUMO3P55854 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.01■□□□□ 0.79
SUMO3P55854 AC068587.7-201ENST00000641602 218 ntBASIC20.01■□□□□ 0.79
SUMO3P55854 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
SUMO3P55854 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20■□□□□ 0.79
SUMO3P55854 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
SUMO3P55854 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SUMO3P55854 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20■□□□□ 0.79
SUMO3P55854 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SUMO3P55854 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
SUMO3P55854 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20■□□□□ 0.79
SUMO3P55854 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
SUMO3P55854 AC024257.2-201ENST00000549699 147 ntBASIC20■□□□□ 0.79
SUMO3P55854 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20■□□□□ 0.79
SUMO3P55854 LINC01960-201ENST00000563759 1884 ntBASIC20■□□□□ 0.79
SUMO3P55854 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20■□□□□ 0.79
SUMO3P55854 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20■□□□□ 0.79
SUMO3P55854 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SUMO3P55854 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
SUMO3P55854 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20■□□□□ 0.79
SUMO3P55854 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20■□□□□ 0.79
SUMO3P55854 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20■□□□□ 0.79
SUMO3P55854 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SUMO3P55854 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
SUMO3P55854 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SUMO3P55854 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SUMO3P55854 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SUMO3P55854 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.99■□□□□ 0.79
SUMO3P55854 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.99■□□□□ 0.79
SUMO3P55854 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.99■□□□□ 0.79
SUMO3P55854 MIR4767-201ENST00000582827 78 ntBASIC19.99■□□□□ 0.79
SUMO3P55854 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.99■□□□□ 0.79
SUMO3P55854 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.99■□□□□ 0.79
SUMO3P55854 AL031602.1-201ENST00000633169 911 ntBASIC19.99■□□□□ 0.79
SUMO3P55854 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SUMO3P55854 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
SUMO3P55854 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SUMO3P55854 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SUMO3P55854 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SUMO3P55854 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SUMO3P55854 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
SUMO3P55854 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
SUMO3P55854 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SUMO3P55854 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SUMO3P55854 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.98■□□□□ 0.79
SUMO3P55854 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SUMO3P55854 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.98■□□□□ 0.79
SUMO3P55854 AC106739.1-201ENST00000617035 715 ntBASIC19.98■□□□□ 0.79
SUMO3P55854 C9orf163-202ENST00000624034 2573 ntBASIC19.98■□□□□ 0.79
SUMO3P55854 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SUMO3P55854 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
SUMO3P55854 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SUMO3P55854 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.98■□□□□ 0.79
SUMO3P55854 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
SUMO3P55854 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SUMO3P55854 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.97■□□□□ 0.79
SUMO3P55854 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SUMO3P55854 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.97■□□□□ 0.79
SUMO3P55854 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.97■□□□□ 0.79
SUMO3P55854 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.97■□□□□ 0.79
SUMO3P55854 AC110285.6-201ENST00000617652 491 ntBASIC19.97■□□□□ 0.79
SUMO3P55854 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.97■□□□□ 0.79
SUMO3P55854 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SUMO3P55854 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
SUMO3P55854 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SUMO3P55854 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SUMO3P55854 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
SUMO3P55854 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.97■□□□□ 0.79
SUMO3P55854 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.96■□□□□ 0.79
SUMO3P55854 BX842568.3-201ENST00000418104 571 ntBASIC19.96■□□□□ 0.79
SUMO3P55854 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms