Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CBX5P45973 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CBX5P45973 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.62
CBX5P45973 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CBX5P45973 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CBX5P45973 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CBX5P45973 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CBX5P45973 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
CBX5P45973 AL592293.1-201ENST00000502889 1188 ntBASIC18.89■□□□□ 0.61
CBX5P45973 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CBX5P45973 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CBX5P45973 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CBX5P45973 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
CBX5P45973 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.88■□□□□ 0.61
CBX5P45973 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CBX5P45973 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CBX5P45973 SPCS2P3-201ENST00000500401 656 ntBASIC18.88■□□□□ 0.61
CBX5P45973 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CBX5P45973 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CBX5P45973 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CBX5P45973 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.88■□□□□ 0.61
CBX5P45973 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CBX5P45973 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CBX5P45973 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CBX5P45973 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CBX5P45973 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.87■□□□□ 0.61
CBX5P45973 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CBX5P45973 PVT1-219ENST00000523427 938 ntTSL 3 BASIC18.87■□□□□ 0.61
CBX5P45973 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC18.87■□□□□ 0.61
CBX5P45973 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC18.87■□□□□ 0.61
CBX5P45973 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CBX5P45973 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.87■□□□□ 0.61
CBX5P45973 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CBX5P45973 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CBX5P45973 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CBX5P45973 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CBX5P45973 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CBX5P45973 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.86■□□□□ 0.61
CBX5P45973 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CBX5P45973 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CBX5P45973 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CBX5P45973 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CBX5P45973 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC18.86■□□□□ 0.61
CBX5P45973 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
CBX5P45973 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CBX5P45973 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CBX5P45973 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CBX5P45973 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CBX5P45973 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
CBX5P45973 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CBX5P45973 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CBX5P45973 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CBX5P45973 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.86■□□□□ 0.61
CBX5P45973 C11orf96-202ENST00000528572 1834 ntBASIC18.86■□□□□ 0.61
CBX5P45973 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CBX5P45973 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CBX5P45973 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CBX5P45973 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CBX5P45973 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CBX5P45973 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CBX5P45973 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC18.85■□□□□ 0.61
CBX5P45973 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.85■□□□□ 0.61
CBX5P45973 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CBX5P45973 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CBX5P45973 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CBX5P45973 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CBX5P45973 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CBX5P45973 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.85■□□□□ 0.61
CBX5P45973 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CBX5P45973 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CBX5P45973 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CBX5P45973 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CBX5P45973 LBH-205ENST00000407930 756 ntTSL 2 BASIC18.84■□□□□ 0.61
CBX5P45973 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CBX5P45973 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CBX5P45973 AC022616.5-201ENST00000518796 181 ntBASIC18.84■□□□□ 0.61
CBX5P45973 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CBX5P45973 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
CBX5P45973 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
CBX5P45973 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
CBX5P45973 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CBX5P45973 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CBX5P45973 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.84■□□□□ 0.61
CBX5P45973 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.84■□□□□ 0.61
CBX5P45973 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
CBX5P45973 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CBX5P45973 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CBX5P45973 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CBX5P45973 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CBX5P45973 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CBX5P45973 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CBX5P45973 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC18.83■□□□□ 0.6
CBX5P45973 GAK-223ENST00000628912 497 ntTSL 5 BASIC18.83■□□□□ 0.6
CBX5P45973 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CBX5P45973 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
CBX5P45973 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CBX5P45973 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.83■□□□□ 0.6
CBX5P45973 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.83■□□□□ 0.6
CBX5P45973 AC139530.1-201ENST00000575312 1977 ntBASIC18.82■□□□□ 0.6
CBX5P45973 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms