Protein–RNA interactions for Protein: P43569

CAF16, CCR4-associated factor 16, yeast

Predictions only

Length 289 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
CAF16	P43569	LPP1	YDR503C	825 nt		4.88	□□□□□ -1.63
CAF16	P43569	UBC8	YEL012W	657 nt		4.88	□□□□□ -1.63
CAF16	P43569	CAB2	YIL083C	1098 nt		4.88	□□□□□ -1.63
CAF16	P43569	MMM1	YLL006W	1281 nt		4.88	□□□□□ -1.63
CAF16	P43569	VMA6	YLR447C	1038 nt		4.88	□□□□□ -1.63
CAF16	P43569	MDM12	YOL009C	816 nt		4.88	□□□□□ -1.63
CAF16	P43569	BUB3	YOR026W	1026 nt		4.88	□□□□□ -1.63
CAF16	P43569	NOC4	YPR144C	1659 nt		4.88	□□□□□ -1.63
CAF16	P43569	PSE1	YMR308C	3270 nt		4.88	□□□□□ -1.63
CAF16	P43569	SLI1	YGR212W	1407 nt		4.88	□□□□□ -1.63
CAF16	P43569	HUL4	YJR036C	2679 nt		4.88	□□□□□ -1.63
CAF16	P43569	YTA6	YPL074W	2265 nt		4.88	□□□□□ -1.63
CAF16	P43569	TDA11	YHR159W	1515 nt		4.87	□□□□□ -1.63
CAF16	P43569	YDR154C	YDR154C	351 nt		4.87	□□□□□ -1.63
CAF16	P43569	SVP26	YHR181W	687 nt		4.87	□□□□□ -1.63
CAF16	P43569	GCD14	YJL125C	1152 nt		4.87	□□□□□ -1.63
CAF16	P43569	PGU1	YJR153W	1086 nt		4.87	□□□□□ -1.63
CAF16	P43569	EOS1	YNL080C	1101 nt		4.87	□□□□□ -1.63
CAF16	P43569	VPS69	YPR087W	321 nt		4.87	□□□□□ -1.63
CAF16	P43569	PLM2	YDR501W	1566 nt		4.87	□□□□□ -1.63
CAF16	P43569	PDI1	YCL043C	1569 nt		4.87	□□□□□ -1.63
CAF16	P43569	UTP18	YJL069C	1785 nt		4.86	□□□□□ -1.63
CAF16	P43569	ALE1	YOR175C	1860 nt		4.86	□□□□□ -1.63
CAF16	P43569	RUB1	YDR139C	234 nt		4.86	□□□□□ -1.63
CAF16	P43569	GLO2	YDR272W	825 nt		4.86	□□□□□ -1.63
CAF16	P43569	YGL041W-A	YGL041W-A	465 nt		4.86	□□□□□ -1.63
CAF16	P43569	CAX4	YGR036C	720 nt		4.86	□□□□□ -1.63
CAF16	P43569	AIM18	YHR198C	966 nt		4.86	□□□□□ -1.63
CAF16	P43569	YHR218W-A	YHR218W-A	318 nt		4.86	□□□□□ -1.63
CAF16	P43569	YKR041W	YKR041W	753 nt		4.86	□□□□□ -1.63
CAF16	P43569	YAR023C	YAR023C	540 nt		4.86	□□□□□ -1.63
CAF16	P43569	YLR126C	YLR126C	756 nt		4.86	□□□□□ -1.63
CAF16	P43569	YMR122C	YMR122C	375 nt		4.86	□□□□□ -1.63
CAF16	P43569	YMR252C	YMR252C	405 nt		4.86	□□□□□ -1.63
CAF16	P43569	snR10	snR10	245 nt		4.86	□□□□□ -1.63
CAF16	P43569	YBL112C	YBL112C	318 nt		4.86	□□□□□ -1.63
CAF16	P43569	YBR144C	YBR144C	315 nt		4.86	□□□□□ -1.63
CAF16	P43569	YBR255C-A	YBR255C-A	363 nt		4.86	□□□□□ -1.63
CAF16	P43569	CDC48	YDL126C	2508 nt		4.86	□□□□□ -1.63
CAF16	P43569	MCM2	YBL023C	2607 nt		4.86	□□□□□ -1.63
CAF16	P43569	PMP3	YDR276C	168 nt		4.85	□□□□□ -1.63
CAF16	P43569	LSM4	YER112W	564 nt		4.85	□□□□□ -1.63
CAF16	P43569	MRF1	YGL143C	1242 nt		4.85	□□□□□ -1.63
CAF16	P43569	YML101C-A	YML101C-A	318 nt		4.85	□□□□□ -1.63
CAF16	P43569	TOM7	YNL070W	183 nt		4.85	□□□□□ -1.63
CAF16	P43569	MRPL27	YBR282W	441 nt		4.85	□□□□□ -1.63
CAF16	P43569	YDR131C	YDR131C	1671 nt		4.85	□□□□□ -1.63
CAF16	P43569	DAK1	YML070W	1755 nt		4.85	□□□□□ -1.63
CAF16	P43569	IKS1	YJL057C	2004 nt		4.85	□□□□□ -1.63
CAF16	P43569	CEX1	YOR112W	2286 nt		4.85	□□□□□ -1.63
CAF16	P43569	AGA1	YNR044W	2178 nt		4.84	□□□□□ -1.63
CAF16	P43569	SEC9	YGR009C	1956 nt		4.84	□□□□□ -1.63
CAF16	P43569	PAL1	YDR348C	1500 nt		4.84	□□□□□ -1.63
CAF16	P43569	YPR196W	YPR196W	1413 nt		4.84	□□□□□ -1.63
CAF16	P43569	SHE9	YDR393W	1371 nt		4.84	□□□□□ -1.63
CAF16	P43569	YDL218W	YDL218W	954 nt		4.84	□□□□□ -1.63
CAF16	P43569	YDR274C	YDR274C	372 nt		4.84	□□□□□ -1.63
CAF16	P43569	YFL051C	YFL051C	483 nt		4.84	□□□□□ -1.63
CAF16	P43569	ARC1	YGL105W	1131 nt		4.84	□□□□□ -1.63
CAF16	P43569	SUP19	tS(UGA)E	82 nt		4.84	□□□□□ -1.63
CAF16	P43569	SUP17	tS(UGA)I	82 nt		4.84	□□□□□ -1.63
CAF16	P43569	SUP16	tS(UGA)P	82 nt		4.84	□□□□□ -1.63
CAF16	P43569	MPC2	YHR162W	390 nt		4.84	□□□□□ -1.63
CAF16	P43569	DJP1	YIR004W	1299 nt		4.84	□□□□□ -1.63
CAF16	P43569	QRI5	YLR204W	336 nt		4.84	□□□□□ -1.63
CAF16	P43569	COS1	YNL336W	1146 nt		4.84	□□□□□ -1.63
CAF16	P43569	CUE5	YOR042W	1236 nt		4.84	□□□□□ -1.63
CAF16	P43569	USV1	YPL230W	1176 nt		4.84	□□□□□ -1.63
CAF16	P43569	MLC2	YPR188C	492 nt		4.84	□□□□□ -1.63
CAF16	P43569	CDC28	YBR160W	897 nt		4.84	□□□□□ -1.63
CAF16	P43569	ERV15	YBR210W	429 nt		4.84	□□□□□ -1.63
CAF16	P43569	STE20	YHL007C	2820 nt		4.83	□□□□□ -1.64
CAF16	P43569	ERT1	YBR239C	1590 nt		4.83	□□□□□ -1.64
CAF16	P43569	CDC1	YDR182W	1476 nt		4.83	□□□□□ -1.64
CAF16	P43569	ACA1	YER045C	1470 nt		4.83	□□□□□ -1.64
CAF16	P43569	FAR10	YLR238W	1437 nt		4.83	□□□□□ -1.64
CAF16	P43569	HES1	YOR237W	1305 nt		4.83	□□□□□ -1.64
CAF16	P43569	COT1	YOR316C	1320 nt		4.83	□□□□□ -1.64
CAF16	P43569	NHP10	YDL002C	612 nt		4.83	□□□□□ -1.64
CAF16	P43569	YET3	YDL072C	612 nt		4.83	□□□□□ -1.64
CAF16	P43569	GRX3	YDR098C	858 nt		4.83	□□□□□ -1.64
CAF16	P43569	PDS1	YDR113C	1122 nt		4.83	□□□□□ -1.64
CAF16	P43569	NBP2	YDR162C	711 nt		4.83	□□□□□ -1.64
CAF16	P43569	PHB1	YGR132C	864 nt		4.83	□□□□□ -1.64
CAF16	P43569	AIM19	YIL087C	474 nt		4.83	□□□□□ -1.64
CAF16	P43569	MTW1	YAL034W-A	870 nt		4.83	□□□□□ -1.64
CAF16	P43569	AHP1	YLR109W	531 nt		4.83	□□□□□ -1.64
CAF16	P43569	YPT6	YLR262C	648 nt		4.83	□□□□□ -1.64
CAF16	P43569	SST2	YLR452C	2097 nt		4.83	□□□□□ -1.64
CAF16	P43569	RAD24	YER173W	1980 nt		4.83	□□□□□ -1.64
CAF16	P43569	YML082W	YML082W	1950 nt		4.83	□□□□□ -1.64
CAF16	P43569	ATH1	YPR026W	3636 nt		4.83	□□□□□ -1.64
CAF16	P43569	TRM12	YML005W	1389 nt		4.82	□□□□□ -1.64
CAF16	P43569	SIT4	YDL047W	936 nt		4.82	□□□□□ -1.64
CAF16	P43569	QRI7	YDL104C	1224 nt		4.82	□□□□□ -1.64
CAF16	P43569	ATP6	Q0085	780 nt		4.82	□□□□□ -1.64
CAF16	P43569	YGL242C	YGL242C	546 nt		4.82	□□□□□ -1.64
CAF16	P43569	YVH1	YIR026C	1095 nt		4.82	□□□□□ -1.64
CAF16	P43569	TDH2	YJR009C	999 nt		4.82	□□□□□ -1.64
CAF16	P43569	CSL4	YNL232W	879 nt		4.82	□□□□□ -1.64

Retrieved 100 of 7,029 protein–RNA pairs in 19.3 ms