Protein–RNA interactions for Protein: P43308

SSR2, Translocon-associated protein subunit beta, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2P43308 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SSR2P43308 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SSR2P43308 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
SSR2P43308 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.02■□□□□ 0.96
SSR2P43308 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.02■□□□□ 0.96
SSR2P43308 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SSR2P43308 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SSR2P43308 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.02■□□□□ 0.96
SSR2P43308 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SSR2P43308 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SSR2P43308 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.02■□□□□ 0.95
SSR2P43308 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SSR2P43308 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SSR2P43308 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
SSR2P43308 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.01■□□□□ 0.95
SSR2P43308 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SSR2P43308 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SSR2P43308 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SSR2P43308 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SSR2P43308 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SSR2P43308 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
SSR2P43308 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SSR2P43308 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC21■□□□□ 0.95
SSR2P43308 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21■□□□□ 0.95
SSR2P43308 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
SSR2P43308 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21■□□□□ 0.95
SSR2P43308 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
SSR2P43308 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
SSR2P43308 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21■□□□□ 0.95
SSR2P43308 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
SSR2P43308 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
SSR2P43308 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SSR2P43308 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.99■□□□□ 0.95
SSR2P43308 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.99■□□□□ 0.95
SSR2P43308 AC133637.1-201ENST00000624115 1537 ntBASIC20.99■□□□□ 0.95
SSR2P43308 AC008406.3-201ENST00000620001 1374 ntBASIC20.99■□□□□ 0.95
SSR2P43308 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SSR2P43308 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.99■□□□□ 0.95
SSR2P43308 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
SSR2P43308 MIR3181-201ENST00000578512 73 ntBASIC20.99■□□□□ 0.95
SSR2P43308 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.99■□□□□ 0.95
SSR2P43308 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.99■□□□□ 0.95
SSR2P43308 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
SSR2P43308 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.99■□□□□ 0.95
SSR2P43308 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
SSR2P43308 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SSR2P43308 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.99■□□□□ 0.95
SSR2P43308 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
SSR2P43308 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SSR2P43308 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SSR2P43308 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SSR2P43308 SYT6-210ENST00000641643 1587 ntBASIC20.98■□□□□ 0.95
SSR2P43308 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SSR2P43308 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SSR2P43308 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.98■□□□□ 0.95
SSR2P43308 DUX4L19-201ENST00000557448 1267 ntBASIC20.98■□□□□ 0.95
SSR2P43308 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SSR2P43308 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
SSR2P43308 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
SSR2P43308 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SSR2P43308 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.98■□□□□ 0.95
SSR2P43308 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SSR2P43308 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
SSR2P43308 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.97■□□□□ 0.95
SSR2P43308 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
SSR2P43308 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SSR2P43308 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.97■□□□□ 0.95
SSR2P43308 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
SSR2P43308 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
SSR2P43308 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SSR2P43308 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
SSR2P43308 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
SSR2P43308 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SSR2P43308 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SSR2P43308 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SSR2P43308 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SSR2P43308 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SSR2P43308 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
SSR2P43308 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
SSR2P43308 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.96■□□□□ 0.95
SSR2P43308 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
SSR2P43308 AC233723.2-201ENST00000623798 2106 ntBASIC20.96■□□□□ 0.95
SSR2P43308 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SSR2P43308 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SSR2P43308 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SSR2P43308 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SSR2P43308 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
SSR2P43308 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SSR2P43308 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SSR2P43308 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SSR2P43308 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SSR2P43308 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SSR2P43308 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
SSR2P43308 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SSR2P43308 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SSR2P43308 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.95■□□□□ 0.94
SSR2P43308 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SSR2P43308 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
SSR2P43308 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
SSR2P43308 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms