Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC1A3P43003 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
SLC1A3P43003 AL356441.2-201ENST00000443009 864 ntBASIC20.25■□□□□ 0.83
SLC1A3P43003 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.25■□□□□ 0.83
SLC1A3P43003 MIR3621-201ENST00000580529 85 ntBASIC20.25■□□□□ 0.83
SLC1A3P43003 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC1A3P43003 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC1A3P43003 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SLC1A3P43003 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
SLC1A3P43003 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC1A3P43003 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC1A3P43003 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC1A3P43003 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.24■□□□□ 0.83
SLC1A3P43003 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SLC1A3P43003 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SLC1A3P43003 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC1A3P43003 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC1A3P43003 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC1A3P43003 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.24■□□□□ 0.83
SLC1A3P43003 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.24■□□□□ 0.83
SLC1A3P43003 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC1A3P43003 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.24■□□□□ 0.83
SLC1A3P43003 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC1A3P43003 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC1A3P43003 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
SLC1A3P43003 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC1A3P43003 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SLC1A3P43003 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC1A3P43003 AC137767.1-201ENST00000602918 1920 ntBASIC20.23■□□□□ 0.83
SLC1A3P43003 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
SLC1A3P43003 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SLC1A3P43003 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC1A3P43003 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC1A3P43003 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC1A3P43003 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC1A3P43003 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SLC1A3P43003 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC1A3P43003 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC1A3P43003 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
SLC1A3P43003 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.22■□□□□ 0.83
SLC1A3P43003 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC1A3P43003 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
SLC1A3P43003 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC1A3P43003 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.21■□□□□ 0.83
SLC1A3P43003 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC1A3P43003 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC1A3P43003 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SLC1A3P43003 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.21■□□□□ 0.83
SLC1A3P43003 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.21■□□□□ 0.83
SLC1A3P43003 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC1A3P43003 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC1A3P43003 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
SLC1A3P43003 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SLC1A3P43003 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
SLC1A3P43003 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
SLC1A3P43003 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.21■□□□□ 0.83
SLC1A3P43003 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.2■□□□□ 0.82
SLC1A3P43003 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC1A3P43003 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
SLC1A3P43003 AC009086.3-201ENST00000623486 1008 ntBASIC20.2■□□□□ 0.82
SLC1A3P43003 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC1A3P43003 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.2■□□□□ 0.82
SLC1A3P43003 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SLC1A3P43003 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.2■□□□□ 0.82
SLC1A3P43003 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
SLC1A3P43003 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC1A3P43003 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.2■□□□□ 0.82
SLC1A3P43003 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
SLC1A3P43003 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.19■□□□□ 0.82
SLC1A3P43003 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.19■□□□□ 0.82
SLC1A3P43003 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC1A3P43003 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC1A3P43003 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.19■□□□□ 0.82
SLC1A3P43003 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SLC1A3P43003 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SLC1A3P43003 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC1A3P43003 AC241377.3-202ENST00000626088 1088 ntBASIC20.19■□□□□ 0.82
SLC1A3P43003 AC241585.3-202ENST00000628937 1088 ntBASIC20.19■□□□□ 0.82
SLC1A3P43003 AC245100.8-202ENST00000629247 1058 ntBASIC20.19■□□□□ 0.82
SLC1A3P43003 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.19■□□□□ 0.82
SLC1A3P43003 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SLC1A3P43003 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC1A3P43003 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
SLC1A3P43003 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
SLC1A3P43003 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC1A3P43003 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
SLC1A3P43003 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC1A3P43003 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.18■□□□□ 0.82
SLC1A3P43003 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.18■□□□□ 0.82
SLC1A3P43003 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.18■□□□□ 0.82
SLC1A3P43003 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC1A3P43003 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SLC1A3P43003 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC1A3P43003 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.18■□□□□ 0.82
SLC1A3P43003 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC1A3P43003 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC1A3P43003 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC1A3P43003 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC1A3P43003 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.17■□□□□ 0.82
SLC1A3P43003 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms