Protein–RNA interactions for Protein: P42695

NCAPD3, Condensin-2 complex subunit D3, humanhuman

Predictions only

Length 1,498 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3P42695 RGMA-211ENST00000557420 989 ntTSL 3 BASIC39.83■■■■□ 3.97
NCAPD3P42695 SMUG1P1-201ENST00000590640 811 ntBASIC39.83■■■■□ 3.97
NCAPD3P42695 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC39.83■■■■□ 3.97
NCAPD3P42695 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC39.83■■■■□ 3.97
NCAPD3P42695 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC39.82■■■■□ 3.96
NCAPD3P42695 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC39.81■■■■□ 3.96
NCAPD3P42695 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC39.81■■■■□ 3.96
NCAPD3P42695 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC39.81■■■■□ 3.96
NCAPD3P42695 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC39.81■■■■□ 3.96
NCAPD3P42695 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC39.81■■■■□ 3.96
NCAPD3P42695 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC39.81■■■■□ 3.96
NCAPD3P42695 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC39.81■■■■□ 3.96
NCAPD3P42695 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC39.81■■■■□ 3.96
NCAPD3P42695 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC39.81■■■■□ 3.96
NCAPD3P42695 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC39.81■■■■□ 3.96
NCAPD3P42695 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC39.81■■■■□ 3.96
NCAPD3P42695 AC098934.4-201ENST00000564127 592 ntBASIC39.81■■■■□ 3.96
NCAPD3P42695 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC39.8■■■■□ 3.96
NCAPD3P42695 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC39.8■■■■□ 3.96
NCAPD3P42695 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC39.8■■■■□ 3.96
NCAPD3P42695 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC39.8■■■■□ 3.96
NCAPD3P42695 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC39.8■■■■□ 3.96
NCAPD3P42695 AC005181.1-201ENST00000604782 1256 ntBASIC39.8■■■■□ 3.96
NCAPD3P42695 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC39.8■■■■□ 3.96
NCAPD3P42695 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC39.79■■■■□ 3.96
NCAPD3P42695 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC39.79■■■■□ 3.96
NCAPD3P42695 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC39.79■■■■□ 3.96
NCAPD3P42695 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC39.79■■■■□ 3.96
NCAPD3P42695 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC39.78■■■■□ 3.96
NCAPD3P42695 FAM201B-201ENST00000458407 597 ntBASIC39.78■■■■□ 3.96
NCAPD3P42695 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC39.78■■■■□ 3.96
NCAPD3P42695 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC39.78■■■■□ 3.96
NCAPD3P42695 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC39.78■■■■□ 3.96
NCAPD3P42695 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC39.78■■■■□ 3.96
NCAPD3P42695 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC39.77■■■■□ 3.96
NCAPD3P42695 ITM2C-210ENST00000620962 501 ntBASIC39.77■■■■□ 3.96
NCAPD3P42695 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC39.77■■■■□ 3.96
NCAPD3P42695 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC39.77■■■■□ 3.96
NCAPD3P42695 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC39.76■■■■□ 3.96
NCAPD3P42695 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC39.76■■■■□ 3.96
NCAPD3P42695 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC39.76■■■■□ 3.96
NCAPD3P42695 SHF-207ENST00000560540 2062 ntTSL 5 BASIC39.76■■■■□ 3.96
NCAPD3P42695 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC39.76■■■■□ 3.95
NCAPD3P42695 AC144652.1-201ENST00000609974 1624 ntBASIC39.75■■■■□ 3.95
NCAPD3P42695 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC39.75■■■■□ 3.95
NCAPD3P42695 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC39.75■■■■□ 3.95
NCAPD3P42695 TBCB-214ENST00000629269 413 ntTSL 5 BASIC39.75■■■■□ 3.95
NCAPD3P42695 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC39.74■■■■□ 3.95
NCAPD3P42695 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC39.74■■■■□ 3.95
NCAPD3P42695 AC079140.4-201ENST00000507448 529 ntBASIC39.74■■■■□ 3.95
NCAPD3P42695 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC39.74■■■■□ 3.95
NCAPD3P42695 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC39.73■■■■□ 3.95
NCAPD3P42695 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC39.73■■■■□ 3.95
NCAPD3P42695 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC39.73■■■■□ 3.95
NCAPD3P42695 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC39.73■■■■□ 3.95
NCAPD3P42695 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC39.73■■■■□ 3.95
NCAPD3P42695 ARL16-209ENST00000573715 763 ntTSL 3 BASIC39.73■■■■□ 3.95
NCAPD3P42695 ARL16-211ENST00000576135 694 ntTSL 3 BASIC39.73■■■■□ 3.95
NCAPD3P42695 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC39.72■■■■□ 3.95
NCAPD3P42695 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC39.72■■■■□ 3.95
NCAPD3P42695 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC39.72■■■■□ 3.95
NCAPD3P42695 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC39.72■■■■□ 3.95
NCAPD3P42695 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC39.72■■■■□ 3.95
NCAPD3P42695 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC39.72■■■■□ 3.95
NCAPD3P42695 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC39.72■■■■□ 3.95
NCAPD3P42695 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC39.72■■■■□ 3.95
NCAPD3P42695 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC39.72■■■■□ 3.95
NCAPD3P42695 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC39.72■■■■□ 3.95
NCAPD3P42695 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC39.72■■■■□ 3.95
NCAPD3P42695 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC39.71■■■■□ 3.95
NCAPD3P42695 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC39.71■■■■□ 3.95
NCAPD3P42695 POU5F1P3-201ENST00000428824 1078 ntBASIC39.71■■■■□ 3.95
NCAPD3P42695 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC39.71■■■■□ 3.95
NCAPD3P42695 PFKL-212ENST00000628044 129 ntTSL 3 BASIC39.71■■■■□ 3.95
NCAPD3P42695 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC39.71■■■■□ 3.95
NCAPD3P42695 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC39.71■■■■□ 3.95
NCAPD3P42695 LINC01529-204ENST00000636474 1715 ntBASIC39.71■■■■□ 3.95
NCAPD3P42695 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC39.71■■■■□ 3.95
NCAPD3P42695 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC39.71■■■■□ 3.95
NCAPD3P42695 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC39.7■■■■□ 3.95
NCAPD3P42695 SLC29A4P1-201ENST00000398760 971 ntBASIC39.7■■■■□ 3.95
NCAPD3P42695 AC007322.1-201ENST00000426983 750 ntBASIC39.69■■■■□ 3.94
NCAPD3P42695 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC39.69■■■■□ 3.94
NCAPD3P42695 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC39.69■■■■□ 3.94
NCAPD3P42695 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC39.69■■■■□ 3.94
NCAPD3P42695 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC39.69■■■■□ 3.94
NCAPD3P42695 CEBPA-AS1-201ENST00000592982 2198 ntBASIC39.69■■■■□ 3.94
NCAPD3P42695 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC39.69■■■■□ 3.94
NCAPD3P42695 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC39.68■■■■□ 3.94
NCAPD3P42695 AC133041.1-202ENST00000642053 222 ntBASIC39.68■■■■□ 3.94
NCAPD3P42695 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC39.68■■■■□ 3.94
NCAPD3P42695 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC39.68■■■■□ 3.94
NCAPD3P42695 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC39.68■■■■□ 3.94
NCAPD3P42695 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC39.68■■■■□ 3.94
NCAPD3P42695 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC39.68■■■■□ 3.94
NCAPD3P42695 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC39.68■■■■□ 3.94
NCAPD3P42695 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC39.68■■■■□ 3.94
NCAPD3P42695 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC39.67■■■■□ 3.94
NCAPD3P42695 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC39.67■■■■□ 3.94
NCAPD3P42695 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC39.67■■■■□ 3.94
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms