Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
KRT20P35900 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
KRT20P35900 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
KRT20P35900 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
KRT20P35900 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.85■□□□□ 0.93
KRT20P35900 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
KRT20P35900 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.85■□□□□ 0.93
KRT20P35900 AL117332.1-201ENST00000622628 974 ntBASIC20.85■□□□□ 0.93
KRT20P35900 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
KRT20P35900 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
KRT20P35900 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
KRT20P35900 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
KRT20P35900 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.85■□□□□ 0.93
KRT20P35900 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
KRT20P35900 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
KRT20P35900 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
KRT20P35900 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
KRT20P35900 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
KRT20P35900 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.84■□□□□ 0.93
KRT20P35900 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.84■□□□□ 0.93
KRT20P35900 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
KRT20P35900 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.84■□□□□ 0.93
KRT20P35900 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.84■□□□□ 0.93
KRT20P35900 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
KRT20P35900 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
KRT20P35900 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
KRT20P35900 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
KRT20P35900 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
KRT20P35900 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.83■□□□□ 0.93
KRT20P35900 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
KRT20P35900 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
KRT20P35900 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
KRT20P35900 AC127496.7-201ENST00000625110 1798 ntBASIC20.83■□□□□ 0.93
KRT20P35900 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.83■□□□□ 0.93
KRT20P35900 AC131212.1-201ENST00000613771 668 ntBASIC20.83■□□□□ 0.93
KRT20P35900 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.83■□□□□ 0.92
KRT20P35900 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
KRT20P35900 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
KRT20P35900 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.83■□□□□ 0.92
KRT20P35900 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
KRT20P35900 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.82■□□□□ 0.92
KRT20P35900 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
KRT20P35900 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
KRT20P35900 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
KRT20P35900 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
KRT20P35900 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
KRT20P35900 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
KRT20P35900 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
KRT20P35900 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
KRT20P35900 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.82■□□□□ 0.92
KRT20P35900 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.82■□□□□ 0.92
KRT20P35900 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.82■□□□□ 0.92
KRT20P35900 MIR3621-201ENST00000580529 85 ntBASIC20.82■□□□□ 0.92
KRT20P35900 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.82■□□□□ 0.92
KRT20P35900 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
KRT20P35900 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
KRT20P35900 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
KRT20P35900 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
KRT20P35900 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
KRT20P35900 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
KRT20P35900 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
KRT20P35900 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
KRT20P35900 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
KRT20P35900 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
KRT20P35900 ECEL1P1-201ENST00000373592 1742 ntBASIC20.81■□□□□ 0.92
KRT20P35900 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
KRT20P35900 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
KRT20P35900 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
KRT20P35900 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
KRT20P35900 AC137767.1-201ENST00000602918 1920 ntBASIC20.81■□□□□ 0.92
KRT20P35900 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
KRT20P35900 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
KRT20P35900 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.81■□□□□ 0.92
KRT20P35900 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
KRT20P35900 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.81■□□□□ 0.92
KRT20P35900 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
KRT20P35900 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.81■□□□□ 0.92
KRT20P35900 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
KRT20P35900 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.81■□□□□ 0.92
KRT20P35900 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
KRT20P35900 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
KRT20P35900 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
KRT20P35900 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
KRT20P35900 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
KRT20P35900 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.8■□□□□ 0.92
KRT20P35900 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.8■□□□□ 0.92
KRT20P35900 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
KRT20P35900 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
KRT20P35900 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.8■□□□□ 0.92
KRT20P35900 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.8■□□□□ 0.92
KRT20P35900 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
KRT20P35900 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.8■□□□□ 0.92
KRT20P35900 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
KRT20P35900 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.8■□□□□ 0.92
KRT20P35900 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
KRT20P35900 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
KRT20P35900 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
KRT20P35900 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
KRT20P35900 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
KRT20P35900 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms