Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
MMP8P22894 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
MMP8P22894 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
MMP8P22894 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC23.3■■□□□ 1.32
MMP8P22894 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC23.3■■□□□ 1.32
MMP8P22894 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
MMP8P22894 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
MMP8P22894 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
MMP8P22894 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
MMP8P22894 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC23.29■■□□□ 1.32
MMP8P22894 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
MMP8P22894 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC23.29■■□□□ 1.32
MMP8P22894 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC23.29■■□□□ 1.32
MMP8P22894 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
MMP8P22894 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
MMP8P22894 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC23.29■■□□□ 1.32
MMP8P22894 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
MMP8P22894 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
MMP8P22894 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
MMP8P22894 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
MMP8P22894 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC23.28■■□□□ 1.32
MMP8P22894 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
MMP8P22894 AC131281.2-201ENST00000520478 145 ntBASIC23.28■■□□□ 1.32
MMP8P22894 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
MMP8P22894 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
MMP8P22894 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
MMP8P22894 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
MMP8P22894 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.32
MMP8P22894 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
MMP8P22894 pRNA.6-201ENST00000610482 90 ntBASIC23.27■■□□□ 1.32
MMP8P22894 pRNA.5-201ENST00000612139 90 ntBASIC23.27■■□□□ 1.32
MMP8P22894 pRNA.11-201ENST00000618423 90 ntBASIC23.27■■□□□ 1.32
MMP8P22894 pRNA.13-201ENST00000619112 90 ntBASIC23.27■■□□□ 1.32
MMP8P22894 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC23.27■■□□□ 1.32
MMP8P22894 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC23.27■■□□□ 1.32
MMP8P22894 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC23.27■■□□□ 1.32
MMP8P22894 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
MMP8P22894 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC23.27■■□□□ 1.32
MMP8P22894 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
MMP8P22894 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
MMP8P22894 LINC01960-201ENST00000563759 1884 ntBASIC23.26■■□□□ 1.31
MMP8P22894 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC23.26■■□□□ 1.31
MMP8P22894 MIR3181-201ENST00000578512 73 ntBASIC23.26■■□□□ 1.31
MMP8P22894 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
MMP8P22894 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC23.26■■□□□ 1.31
MMP8P22894 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC23.26■■□□□ 1.31
MMP8P22894 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
MMP8P22894 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
MMP8P22894 AC079834.2-201ENST00000609776 1949 ntBASIC23.25■■□□□ 1.31
MMP8P22894 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
MMP8P22894 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
MMP8P22894 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
MMP8P22894 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
MMP8P22894 AC133637.1-201ENST00000624115 1537 ntBASIC23.25■■□□□ 1.31
MMP8P22894 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
MMP8P22894 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC23.25■■□□□ 1.31
MMP8P22894 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
MMP8P22894 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
MMP8P22894 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC23.24■■□□□ 1.31
MMP8P22894 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC23.24■■□□□ 1.31
MMP8P22894 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
MMP8P22894 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
MMP8P22894 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
MMP8P22894 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC23.24■■□□□ 1.31
MMP8P22894 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC23.24■■□□□ 1.31
MMP8P22894 AC092171.4-201ENST00000609130 632 ntBASIC23.24■■□□□ 1.31
MMP8P22894 ECEL1P1-201ENST00000373592 1742 ntBASIC23.24■■□□□ 1.31
MMP8P22894 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
MMP8P22894 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
MMP8P22894 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
MMP8P22894 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
MMP8P22894 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
MMP8P22894 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC23.23■■□□□ 1.31
MMP8P22894 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC23.23■■□□□ 1.31
MMP8P22894 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC23.23■■□□□ 1.31
MMP8P22894 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC23.23■■□□□ 1.31
MMP8P22894 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC23.23■■□□□ 1.31
MMP8P22894 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC23.23■■□□□ 1.31
MMP8P22894 AC242852.2-201ENST00000615738 1807 ntBASIC23.23■■□□□ 1.31
MMP8P22894 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC23.23■■□□□ 1.31
MMP8P22894 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
MMP8P22894 EP400NL-214ENST00000641289 2402 ntBASIC23.22■■□□□ 1.31
MMP8P22894 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
MMP8P22894 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
MMP8P22894 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC23.22■■□□□ 1.31
MMP8P22894 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
MMP8P22894 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC23.22■■□□□ 1.31
MMP8P22894 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
MMP8P22894 LSR-203ENST00000360798 1963 ntTSL 2 BASIC23.21■■□□□ 1.31
MMP8P22894 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC23.21■■□□□ 1.31
MMP8P22894 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
MMP8P22894 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
MMP8P22894 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC23.21■■□□□ 1.31
MMP8P22894 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC23.21■■□□□ 1.31
MMP8P22894 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
MMP8P22894 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
MMP8P22894 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC23.21■■□□□ 1.31
MMP8P22894 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
MMP8P22894 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
MMP8P22894 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms