Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18.2■□□□□ 0.5
CCL3L1P16619 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC18.2■□□□□ 0.5
CCL3L1P16619 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCL3L1P16619 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CCL3L1P16619 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC18.2■□□□□ 0.5
CCL3L1P16619 PTMA-205ENST00000410064 814 ntTSL 2 BASIC18.2■□□□□ 0.5
CCL3L1P16619 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.2■□□□□ 0.5
CCL3L1P16619 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC18.2■□□□□ 0.5
CCL3L1P16619 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCL3L1P16619 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCL3L1P16619 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
CCL3L1P16619 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCL3L1P16619 AC135279.3-201ENST00000610945 1311 ntBASIC18.2■□□□□ 0.5
CCL3L1P16619 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCL3L1P16619 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC18.2■□□□□ 0.5
CCL3L1P16619 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC18.2■□□□□ 0.5
CCL3L1P16619 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CCL3L1P16619 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.19■□□□□ 0.5
CCL3L1P16619 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CCL3L1P16619 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCL3L1P16619 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCL3L1P16619 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC18.19■□□□□ 0.5
CCL3L1P16619 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCL3L1P16619 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCL3L1P16619 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CCL3L1P16619 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC18.19■□□□□ 0.5
CCL3L1P16619 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC18.19■□□□□ 0.5
CCL3L1P16619 PBX2P1-201ENST00000493219 1291 ntBASIC18.19■□□□□ 0.5
CCL3L1P16619 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC18.19■□□□□ 0.5
CCL3L1P16619 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCL3L1P16619 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
CCL3L1P16619 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.19■□□□□ 0.5
CCL3L1P16619 AC011298.3-201ENST00000615796 283 ntBASIC18.19■□□□□ 0.5
CCL3L1P16619 AC068473.5-201ENST00000616428 2072 ntBASIC18.19■□□□□ 0.5
CCL3L1P16619 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCL3L1P16619 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
CCL3L1P16619 C1orf229-201ENST00000623686 2258 ntBASIC18.19■□□□□ 0.5
CCL3L1P16619 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC18.19■□□□□ 0.5
CCL3L1P16619 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCL3L1P16619 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCL3L1P16619 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.18■□□□□ 0.5
CCL3L1P16619 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
CCL3L1P16619 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC18.18■□□□□ 0.5
CCL3L1P16619 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCL3L1P16619 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCL3L1P16619 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCL3L1P16619 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCL3L1P16619 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCL3L1P16619 MTURN-203ENST00000409688 843 ntTSL 2 BASIC18.18■□□□□ 0.5
CCL3L1P16619 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.18■□□□□ 0.5
CCL3L1P16619 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC18.18■□□□□ 0.5
CCL3L1P16619 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCL3L1P16619 MIR4767-201ENST00000582827 78 ntBASIC18.18■□□□□ 0.5
CCL3L1P16619 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.18■□□□□ 0.5
CCL3L1P16619 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
CCL3L1P16619 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC18.18■□□□□ 0.5
CCL3L1P16619 AC136469.2-201ENST00000623944 1028 ntBASIC18.18■□□□□ 0.5
CCL3L1P16619 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CCL3L1P16619 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
CCL3L1P16619 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCL3L1P16619 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CCL3L1P16619 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CCL3L1P16619 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCL3L1P16619 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
CCL3L1P16619 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC18.17■□□□□ 0.5
CCL3L1P16619 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC18.17■□□□□ 0.5
CCL3L1P16619 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CCL3L1P16619 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.17■□□□□ 0.5
CCL3L1P16619 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC18.17■□□□□ 0.5
CCL3L1P16619 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC18.17■□□□□ 0.5
CCL3L1P16619 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
CCL3L1P16619 GCA-201ENST00000233612 1694 ntTSL 2 BASIC18.17■□□□□ 0.5
CCL3L1P16619 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
CCL3L1P16619 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCL3L1P16619 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCL3L1P16619 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
CCL3L1P16619 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.16■□□□□ 0.5
CCL3L1P16619 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCL3L1P16619 AL139246.5-201ENST00000606645 996 ntBASIC18.16■□□□□ 0.5
CCL3L1P16619 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCL3L1P16619 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCL3L1P16619 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCL3L1P16619 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCL3L1P16619 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCL3L1P16619 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC18.16■□□□□ 0.5
CCL3L1P16619 AC133561.1-201ENST00000568600 2415 ntBASIC18.15■□□□□ 0.5
CCL3L1P16619 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.15■□□□□ 0.5
CCL3L1P16619 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCL3L1P16619 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCL3L1P16619 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCL3L1P16619 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCL3L1P16619 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC18.15■□□□□ 0.5
CCL3L1P16619 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC18.15■□□□□ 0.5
CCL3L1P16619 AC106739.1-201ENST00000617035 715 ntBASIC18.15■□□□□ 0.5
CCL3L1P16619 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CCL3L1P16619 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCL3L1P16619 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCL3L1P16619 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CCL3L1P16619 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCL3L1P16619 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms