Protein–RNA interactions for Protein: P16104

H2AFX, Histone H2AX, humanhuman

Predicted RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFXP16104 KRT18P10-201ENST00000388836 1287 ntBASIC23.03■■□□□ 1.28
H2AFXP16104 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC23.03■■□□□ 1.28
H2AFXP16104 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC23.03■■□□□ 1.28
H2AFXP16104 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
H2AFXP16104 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
H2AFXP16104 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC23.03■■□□□ 1.28
H2AFXP16104 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
H2AFXP16104 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
H2AFXP16104 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC23.02■■□□□ 1.28
H2AFXP16104 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
H2AFXP16104 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
H2AFXP16104 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC23.02■■□□□ 1.28
H2AFXP16104 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC23.02■■□□□ 1.28
H2AFXP16104 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
H2AFXP16104 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
H2AFXP16104 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC23.02■■□□□ 1.28
H2AFXP16104 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.27
H2AFXP16104 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
H2AFXP16104 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
H2AFXP16104 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC23.01■■□□□ 1.27
H2AFXP16104 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC23.01■■□□□ 1.27
H2AFXP16104 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
H2AFXP16104 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
H2AFXP16104 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
H2AFXP16104 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
H2AFXP16104 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
H2AFXP16104 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
H2AFXP16104 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC23.01■■□□□ 1.27
H2AFXP16104 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
H2AFXP16104 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
H2AFXP16104 Z98882.1-201ENST00000622160 2253 ntBASIC23.01■■□□□ 1.27
H2AFXP16104 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
H2AFXP16104 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC23■■□□□ 1.27
H2AFXP16104 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC23■■□□□ 1.27
H2AFXP16104 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
H2AFXP16104 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
H2AFXP16104 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
H2AFXP16104 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
H2AFXP16104 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
H2AFXP16104 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
H2AFXP16104 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC23■■□□□ 1.27
H2AFXP16104 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
H2AFXP16104 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC22.99■■□□□ 1.27
H2AFXP16104 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
H2AFXP16104 SMPD5-203ENST00000639008 1464 ntBASIC22.99■■□□□ 1.27
H2AFXP16104 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC22.99■■□□□ 1.27
H2AFXP16104 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC22.99■■□□□ 1.27
H2AFXP16104 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC22.99■■□□□ 1.27
H2AFXP16104 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
H2AFXP16104 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
H2AFXP16104 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
H2AFXP16104 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
H2AFXP16104 GOLGA2P6-201ENST00000340929 2049 ntBASIC22.99■■□□□ 1.27
H2AFXP16104 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC22.99■■□□□ 1.27
H2AFXP16104 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
H2AFXP16104 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
H2AFXP16104 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
H2AFXP16104 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
H2AFXP16104 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
H2AFXP16104 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
H2AFXP16104 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
H2AFXP16104 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC22.98■■□□□ 1.27
H2AFXP16104 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC22.98■■□□□ 1.27
H2AFXP16104 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
H2AFXP16104 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC22.98■■□□□ 1.27
H2AFXP16104 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
H2AFXP16104 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC22.97■■□□□ 1.27
H2AFXP16104 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC22.97■■□□□ 1.27
H2AFXP16104 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
H2AFXP16104 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
H2AFXP16104 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC22.97■■□□□ 1.27
H2AFXP16104 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
H2AFXP16104 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC22.96■■□□□ 1.27
H2AFXP16104 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
H2AFXP16104 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC22.96■■□□□ 1.27
H2AFXP16104 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC22.96■■□□□ 1.27
H2AFXP16104 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
H2AFXP16104 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC22.96■■□□□ 1.27
H2AFXP16104 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC22.96■■□□□ 1.27
H2AFXP16104 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
H2AFXP16104 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
H2AFXP16104 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC22.95■■□□□ 1.27
H2AFXP16104 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC22.95■■□□□ 1.27
H2AFXP16104 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC22.95■■□□□ 1.27
H2AFXP16104 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
H2AFXP16104 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
H2AFXP16104 AL162393.1-201ENST00000437852 946 ntBASIC22.95■■□□□ 1.26
H2AFXP16104 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
H2AFXP16104 AC131274.2-201ENST00000580697 1507 ntBASIC22.95■■□□□ 1.26
H2AFXP16104 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC22.95■■□□□ 1.26
H2AFXP16104 DUX4L11-201ENST00000611504 1267 ntBASIC22.95■■□□□ 1.26
H2AFXP16104 DUX4L12-201ENST00000614593 1267 ntBASIC22.95■■□□□ 1.26
H2AFXP16104 DUX4L14-201ENST00000621227 1267 ntBASIC22.95■■□□□ 1.26
H2AFXP16104 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
H2AFXP16104 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC22.94■■□□□ 1.26
H2AFXP16104 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
H2AFXP16104 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
H2AFXP16104 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC22.94■■□□□ 1.26
H2AFXP16104 ADM-207ENST00000530439 1839 ntTSL 2 BASIC22.94■■□□□ 1.26
H2AFXP16104 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC22.94■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms