Protein–RNA interactions for Protein: P12956

XRCC6, X-ray repair cross-complementing protein 6, humanhuman

Known RBP eCLIP

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6P12956 FAM234B-202ENST00000416494 2623 ntTSL 213.57□□□□□ -0.241e-41■■□□□ 14.3
XRCC6P12956 FAM234B-201ENST00000197268 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.551e-41■■□□□ 14.3
XRCC6P12956 ZNF451-207ENST00000444273 3402 ntTSL 1 (best)19.76■□□□□ 0.756e-6■■□□□ 14.3
XRCC6P12956 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.56e-6■■□□□ 14.3
XRCC6P12956 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.476e-6■■□□□ 14.3
XRCC6P12956 ZNF451-211ENST00000504603 561 ntTSL 53.82□□□□□ -1.86e-6■■□□□ 14.3
XRCC6P12956 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.986e-6■■□□□ 14.3
XRCC6P12956 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.32e-6■■□□□ 14.3
XRCC6P12956 ACIN1-221ENST00000557432 642 ntTSL 313.88□□□□□ -0.193e-10■■□□□ 14.2
XRCC6P12956 ACIN1-208ENST00000553721 610 ntTSL 311.17□□□□□ -0.623e-10■■□□□ 14.2
XRCC6P12956 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.845e-8■■□□□ 14.2
XRCC6P12956 RABL6-206ENST00000436380 2547 ntAPPRIS ALT2 TSL 219.18■□□□□ 0.665e-8■■□□□ 14.2
XRCC6P12956 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.571e-8■■□□□ 14.2
XRCC6P12956 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.41e-8■■□□□ 14.2
XRCC6P12956 RPS5-203ENST00000596314 718 ntTSL 517.16■□□□□ 0.341e-8■■□□□ 14.2
XRCC6P12956 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.151e-8■■□□□ 14.2
XRCC6P12956 RPS5-204ENST00000598098 536 ntTSL 2 BASIC14.74□□□□□ -0.051e-8■■□□□ 14.2
XRCC6P12956 RPS5-205ENST00000598495 800 ntTSL 3 BASIC14.24□□□□□ -0.131e-8■■□□□ 14.2
XRCC6P12956 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.353e-7■■□□□ 14.2
XRCC6P12956 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.511e-8■■□□□ 14.1
XRCC6P12956 PMM2-212ENST00000566604 986 ntTSL 217.2■□□□□ 0.341e-8■■□□□ 14.1
XRCC6P12956 PMM2-211ENST00000566540 1557 ntTSL 1 (best)16.93■□□□□ 0.31e-8■■□□□ 14.1
XRCC6P12956 PMM2-203ENST00000562318 931 ntTSL 216.27■□□□□ 0.21e-8■■□□□ 14.1
XRCC6P12956 PMM2-214ENST00000567697 5409 ntTSL 1 (best)14.8□□□□□ -0.041e-8■■□□□ 14.1
XRCC6P12956 PMM2-207ENST00000565221 793 ntTSL 1 (best)13.31□□□□□ -0.281e-8■■□□□ 14.1
XRCC6P12956 PMM2-216ENST00000569958 698 ntTSL 2 BASIC13.25□□□□□ -0.291e-8■■□□□ 14.1
XRCC6P12956 PMM2-218ENST00000570134 573 ntTSL 512.83□□□□□ -0.361e-8■■□□□ 14.1
XRCC6P12956 PMM2-213ENST00000566983 907 ntTSL 5 BASIC10.51□□□□□ -0.731e-8■■□□□ 14.1
XRCC6P12956 PMM2-209ENST00000565896 514 ntTSL 410.01□□□□□ -0.811e-8■■□□□ 14.1
XRCC6P12956 PMM2-217ENST00000570076 1002 ntTSL 29.04□□□□□ -0.961e-8■■□□□ 14.1
XRCC6P12956 PMM2-215ENST00000568602 550 ntTSL 58.49□□□□□ -1.051e-8■■□□□ 14.1
XRCC6P12956 PMM2-206ENST00000564069 567 ntTSL 47.19□□□□□ -1.261e-8■■□□□ 14.1
XRCC6P12956 YWHAZ-213ENST00000492736 681 ntTSL 324.03■■□□□ 1.442e-8■■□□□ 14.1
XRCC6P12956 YWHAZ-221ENST00000523131 567 ntTSL 522.55■■□□□ 1.22e-8■■□□□ 14.1
XRCC6P12956 YWHAZ-223ENST00000523938 626 ntTSL 522.45■■□□□ 1.182e-8■■□□□ 14.1
XRCC6P12956 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC22.12■■□□□ 1.132e-8■■□□□ 14.1
XRCC6P12956 YWHAZ-208ENST00000418997 996 ntTSL 221.89■■□□□ 1.092e-8■■□□□ 14.1
XRCC6P12956 YWHAZ-210ENST00000437293 701 ntTSL 321.36■■□□□ 1.012e-8■■□□□ 14.1
XRCC6P12956 JPT2-213ENST00000569256 911 ntTSL 1 (best)20.04■□□□□ 0.82e-8■■□□□ 14.1
XRCC6P12956 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC19.69■□□□□ 0.742e-18■■□□□ 14.1
XRCC6P12956 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC19.63■□□□□ 0.732e-18■■□□□ 14.1
XRCC6P12956 TBRG4-214ENST00000488222 972 ntTSL 319.13■□□□□ 0.652e-18■■□□□ 14.1
XRCC6P12956 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.632e-18■■□□□ 14.1
XRCC6P12956 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.562e-18■■□□□ 14.1
XRCC6P12956 JPT2-209ENST00000566742 593 ntTSL 418.3■□□□□ 0.522e-8■■□□□ 14.1
XRCC6P12956 TBRG4-213ENST00000484326 835 ntTSL 217.29■□□□□ 0.362e-18■■□□□ 14.1
XRCC6P12956 TBRG4-204ENST00000461363 856 ntTSL 217.29■□□□□ 0.362e-18■■□□□ 14.1
XRCC6P12956 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC17.05■□□□□ 0.321e-6■■□□□ 14.1
XRCC6P12956 RBM15-202ENST00000487146 3316 ntTSL 1 (best) BASIC16.86■□□□□ 0.291e-6■■□□□ 14.1
XRCC6P12956 RBM15-205ENST00000618772 3431 ntTSL 1 (best) BASIC16.41■□□□□ 0.221e-6■■□□□ 14.1
XRCC6P12956 RBM15-204ENST00000617047 3284 ntTSL 1 (best) BASIC16.22■□□□□ 0.191e-6■■□□□ 14.1
XRCC6P12956 RBM15-201ENST00000369784 4244 ntTSL 1 (best) BASIC15.67■□□□□ 0.11e-6■■□□□ 14.1
XRCC6P12956 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.072e-8■■□□□ 14.1
XRCC6P12956 JPT2-206ENST00000562684 3185 ntTSL 2 BASIC14.98□□□□□ -0.012e-8■■□□□ 14.1
XRCC6P12956 JPT2-201ENST00000248098 3718 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.082e-8■■□□□ 14.1
XRCC6P12956 TBRG4-209ENST00000478532 945 ntTSL 514.43□□□□□ -0.12e-18■■□□□ 14.1
XRCC6P12956 TBRG4-217ENST00000495973 3409 ntTSL 1 (best)13.45□□□□□ -0.262e-18■■□□□ 14.1
XRCC6P12956 JPT2-202ENST00000382710 962 ntTSL 2 BASIC13.15□□□□□ -0.32e-8■■□□□ 14.1
XRCC6P12956 YWHAZ-202ENST00000395948 812 ntTSL 3 BASIC10.77□□□□□ -0.692e-8■■□□□ 14.1
XRCC6P12956 JPT2-205ENST00000562569 458 ntTSL 37.27□□□□□ -1.252e-8■■□□□ 14.1
XRCC6P12956 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.742e-8■■□□□ 14.1
XRCC6P12956 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.832e-8■■□□□ 14.1
XRCC6P12956 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.28e-12■■□□□ 14.1
XRCC6P12956 BSG-212ENST00000590218 545 ntTSL 221.51■■□□□ 1.038e-12■■□□□ 14.1
XRCC6P12956 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC19.49■□□□□ 0.718e-12■■□□□ 14.1
XRCC6P12956 BSG-214ENST00000614867 960 ntTSL 3 BASIC18.92■□□□□ 0.628e-12■■□□□ 14.1
XRCC6P12956 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC18.84■□□□□ 0.618e-12■■□□□ 14.1
XRCC6P12956 BSG-210ENST00000576925 611 ntTSL 218.77■□□□□ 0.68e-12■■□□□ 14.1
XRCC6P12956 BSG-207ENST00000573216 545 ntTSL 418.77■□□□□ 0.68e-12■■□□□ 14.1
XRCC6P12956 BSG-215ENST00000618006 1329 ntTSL 2 BASIC18.46■□□□□ 0.558e-12■■□□□ 14.1
XRCC6P12956 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC17.63■□□□□ 0.418e-12■■□□□ 14.1
XRCC6P12956 BSG-213ENST00000613627 689 ntTSL 317.59■□□□□ 0.418e-12■■□□□ 14.1
XRCC6P12956 BSG-206ENST00000572899 582 ntTSL 217.5■□□□□ 0.398e-12■■□□□ 14.1
XRCC6P12956 SPEN-201ENST00000375759 12232 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.624e-7■■□□□ 14.1
XRCC6P12956 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.582e-6■■□□□ 14
XRCC6P12956 TMC6-206ENST00000586271 970 ntTSL 221.22■□□□□ 0.994e-6■■□□□ 14
XRCC6P12956 PLXDC1-215ENST00000579190 565 ntTSL 418.58■□□□□ 0.562e-11■■□□□ 14
XRCC6P12956 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.344e-6■■□□□ 13.9
XRCC6P12956 NASP-208ENST00000470768 1036 ntTSL 315.79■□□□□ 0.124e-6■■□□□ 13.9
XRCC6P12956 NASP-211ENST00000525515 565 ntTSL 513.1□□□□□ -0.314e-6■■□□□ 13.9
XRCC6P12956 NASP-212ENST00000527359 743 ntTSL 313.1□□□□□ -0.314e-6■■□□□ 13.9
XRCC6P12956 NASP-205ENST00000437901 874 ntTSL 513.03□□□□□ -0.324e-6■■□□□ 13.9
XRCC6P12956 NASP-204ENST00000437362 999 ntTSL 213□□□□□ -0.334e-6■■□□□ 13.9
XRCC6P12956 NASP-206ENST00000453748 2080 ntTSL 212.23□□□□□ -0.454e-6■■□□□ 13.9
XRCC6P12956 NASP-216ENST00000528238 894 ntAPPRIS ALT2 TSL 510.41□□□□□ -0.744e-6■■□□□ 13.9
XRCC6P12956 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.685e-6■■□□□ 13.9
XRCC6P12956 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC24.15■■□□□ 1.466e-7■■□□□ 13.9
XRCC6P12956 APOH-203ENST00000581797 748 ntTSL 37.27□□□□□ -1.251e-6■■□□□ 13.9
XRCC6P12956 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.511e-6■■□□□ 13.9
XRCC6P12956 APOH-204ENST00000585162 407 ntTSL 24□□□□□ -1.771e-6■■□□□ 13.9
XRCC6P12956 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC8.84□□□□□ -0.992e-6■■□□□ 13.9
XRCC6P12956 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC7.14□□□□□ -1.272e-6■■□□□ 13.9
XRCC6P12956 CPED1-207ENST00000466055 543 ntTSL 36.95□□□□□ -1.32e-6■■□□□ 13.9
XRCC6P12956 CPNE7-205ENST00000529800 519 ntTSL 511.09□□□□□ -0.633e-6■■□□□ 13.8
XRCC6P12956 TUBB4B-202ENST00000604929 2035 ntTSL 1 (best)22.12■■□□□ 1.134e-6■■□□□ 13.8
XRCC6P12956 COL18A1-205ENST00000423214 839 ntTSL 517.88■□□□□ 0.452e-11■■□□□ 13.8
XRCC6P12956 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.434e-6■■□□□ 13.8
XRCC6P12956 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC16.28■□□□□ 0.22e-11■■□□□ 13.8
XRCC6P12956 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.192e-11■■□□□ 13.8
XRCC6P12956 RBM8A-204ENST00000583313 4961 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.122e-11■■□□□ 13.8
Retrieved 100 of 6,788 protein–RNA pairs in 41 ms