Protein–RNA interactions for Protein: P11279

LAMP1, Lysosome-associated membrane glycoprotein 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1P11279 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LAMP1P11279 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.93■□□□□ 0.94
LAMP1P11279 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LAMP1P11279 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LAMP1P11279 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
LAMP1P11279 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LAMP1P11279 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LAMP1P11279 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LAMP1P11279 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LAMP1P11279 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LAMP1P11279 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LAMP1P11279 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
LAMP1P11279 CLDN5-201ENST00000403084 2357 ntBASIC20.92■□□□□ 0.94
LAMP1P11279 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LAMP1P11279 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LAMP1P11279 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LAMP1P11279 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LAMP1P11279 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
LAMP1P11279 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
LAMP1P11279 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LAMP1P11279 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LAMP1P11279 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.92■□□□□ 0.94
LAMP1P11279 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
LAMP1P11279 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LAMP1P11279 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LAMP1P11279 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LAMP1P11279 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LAMP1P11279 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
LAMP1P11279 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LAMP1P11279 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.91■□□□□ 0.94
LAMP1P11279 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
LAMP1P11279 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
LAMP1P11279 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.91■□□□□ 0.94
LAMP1P11279 AC009086.3-201ENST00000623486 1008 ntBASIC20.91■□□□□ 0.94
LAMP1P11279 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.91■□□□□ 0.94
LAMP1P11279 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LAMP1P11279 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
LAMP1P11279 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
LAMP1P11279 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
LAMP1P11279 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
LAMP1P11279 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LAMP1P11279 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LAMP1P11279 C17orf82-201ENST00000623772 1530 ntBASIC20.9■□□□□ 0.94
LAMP1P11279 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LAMP1P11279 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LAMP1P11279 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.9■□□□□ 0.94
LAMP1P11279 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LAMP1P11279 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.9■□□□□ 0.94
LAMP1P11279 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
LAMP1P11279 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LAMP1P11279 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
LAMP1P11279 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LAMP1P11279 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
LAMP1P11279 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.89■□□□□ 0.94
LAMP1P11279 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.89■□□□□ 0.94
LAMP1P11279 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LAMP1P11279 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.89■□□□□ 0.93
LAMP1P11279 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.89■□□□□ 0.93
LAMP1P11279 UNC93B8-201ENST00000511903 705 ntBASIC20.89■□□□□ 0.93
LAMP1P11279 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
LAMP1P11279 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LAMP1P11279 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LAMP1P11279 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LAMP1P11279 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
LAMP1P11279 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LAMP1P11279 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LAMP1P11279 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
LAMP1P11279 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.88■□□□□ 0.93
LAMP1P11279 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
LAMP1P11279 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
LAMP1P11279 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LAMP1P11279 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LAMP1P11279 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.87■□□□□ 0.93
LAMP1P11279 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.87■□□□□ 0.93
LAMP1P11279 AC092053.2-201ENST00000640557 1818 ntBASIC20.87■□□□□ 0.93
LAMP1P11279 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
LAMP1P11279 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
LAMP1P11279 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LAMP1P11279 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
LAMP1P11279 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.87■□□□□ 0.93
LAMP1P11279 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.86■□□□□ 0.93
LAMP1P11279 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LAMP1P11279 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
LAMP1P11279 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LAMP1P11279 AC004687.1-201ENST00000579003 1625 ntBASIC20.86■□□□□ 0.93
LAMP1P11279 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.86■□□□□ 0.93
LAMP1P11279 LINC01960-201ENST00000563759 1884 ntBASIC20.86■□□□□ 0.93
LAMP1P11279 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
LAMP1P11279 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LAMP1P11279 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
LAMP1P11279 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LAMP1P11279 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LAMP1P11279 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.86■□□□□ 0.93
LAMP1P11279 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LAMP1P11279 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LAMP1P11279 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LAMP1P11279 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.85■□□□□ 0.93
LAMP1P11279 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
LAMP1P11279 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.85■□□□□ 0.93
LAMP1P11279 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 13 ms