Protein–RNA interactions for Protein: P0DMR1

HNRNPCL4, Heterogeneous nuclear ribonucleoprotein C-like 4, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPCL4P0DMR1 LINC00565-201ENST00000562710 2331 ntBASIC20.47■□□□□ 0.87
HNRNPCL4P0DMR1 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
HNRNPCL4P0DMR1 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HNRNPCL4P0DMR1 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HNRNPCL4P0DMR1 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.46■□□□□ 0.87
HNRNPCL4P0DMR1 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
HNRNPCL4P0DMR1 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.46■□□□□ 0.87
HNRNPCL4P0DMR1 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HNRNPCL4P0DMR1 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.46■□□□□ 0.87
HNRNPCL4P0DMR1 C17orf82-201ENST00000623772 1530 ntBASIC20.46■□□□□ 0.87
HNRNPCL4P0DMR1 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
HNRNPCL4P0DMR1 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HNRNPCL4P0DMR1 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HNRNPCL4P0DMR1 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HNRNPCL4P0DMR1 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.46■□□□□ 0.87
HNRNPCL4P0DMR1 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
HNRNPCL4P0DMR1 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.45■□□□□ 0.87
HNRNPCL4P0DMR1 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
HNRNPCL4P0DMR1 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
HNRNPCL4P0DMR1 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HNRNPCL4P0DMR1 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
HNRNPCL4P0DMR1 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HNRNPCL4P0DMR1 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
HNRNPCL4P0DMR1 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
HNRNPCL4P0DMR1 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HNRNPCL4P0DMR1 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
HNRNPCL4P0DMR1 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
HNRNPCL4P0DMR1 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
HNRNPCL4P0DMR1 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
HNRNPCL4P0DMR1 AC139530.1-201ENST00000575312 1977 ntBASIC20.45■□□□□ 0.86
HNRNPCL4P0DMR1 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
HNRNPCL4P0DMR1 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
HNRNPCL4P0DMR1 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.44■□□□□ 0.86
HNRNPCL4P0DMR1 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.44■□□□□ 0.86
HNRNPCL4P0DMR1 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.44■□□□□ 0.86
HNRNPCL4P0DMR1 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HNRNPCL4P0DMR1 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HNRNPCL4P0DMR1 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HNRNPCL4P0DMR1 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HNRNPCL4P0DMR1 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
HNRNPCL4P0DMR1 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HNRNPCL4P0DMR1 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HNRNPCL4P0DMR1 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HNRNPCL4P0DMR1 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HNRNPCL4P0DMR1 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HNRNPCL4P0DMR1 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
HNRNPCL4P0DMR1 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
HNRNPCL4P0DMR1 AC092053.2-201ENST00000640557 1818 ntBASIC20.43■□□□□ 0.86
HNRNPCL4P0DMR1 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
HNRNPCL4P0DMR1 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
HNRNPCL4P0DMR1 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.43■□□□□ 0.86
HNRNPCL4P0DMR1 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HNRNPCL4P0DMR1 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.43■□□□□ 0.86
HNRNPCL4P0DMR1 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.43■□□□□ 0.86
HNRNPCL4P0DMR1 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
HNRNPCL4P0DMR1 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HNRNPCL4P0DMR1 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.43■□□□□ 0.86
HNRNPCL4P0DMR1 MIR6724-1-201ENST00000616420 92 ntBASIC20.43■□□□□ 0.86
HNRNPCL4P0DMR1 MIR6724-2-201ENST00000616483 92 ntBASIC20.43■□□□□ 0.86
HNRNPCL4P0DMR1 MIR6724-4-201ENST00000617390 92 ntBASIC20.43■□□□□ 0.86
HNRNPCL4P0DMR1 MIR6724-3-201ENST00000622482 92 ntBASIC20.43■□□□□ 0.86
HNRNPCL4P0DMR1 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.43■□□□□ 0.86
HNRNPCL4P0DMR1 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
HNRNPCL4P0DMR1 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.43■□□□□ 0.86
HNRNPCL4P0DMR1 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
HNRNPCL4P0DMR1 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HNRNPCL4P0DMR1 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
HNRNPCL4P0DMR1 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HNRNPCL4P0DMR1 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HNRNPCL4P0DMR1 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
HNRNPCL4P0DMR1 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
HNRNPCL4P0DMR1 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HNRNPCL4P0DMR1 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.42■□□□□ 0.86
HNRNPCL4P0DMR1 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.42■□□□□ 0.86
HNRNPCL4P0DMR1 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
HNRNPCL4P0DMR1 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HNRNPCL4P0DMR1 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.42■□□□□ 0.86
HNRNPCL4P0DMR1 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
HNRNPCL4P0DMR1 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HNRNPCL4P0DMR1 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HNRNPCL4P0DMR1 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.42■□□□□ 0.86
HNRNPCL4P0DMR1 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
HNRNPCL4P0DMR1 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.42■□□□□ 0.86
HNRNPCL4P0DMR1 AC080038.3-201ENST00000623346 1952 ntBASIC20.42■□□□□ 0.86
HNRNPCL4P0DMR1 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
HNRNPCL4P0DMR1 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
HNRNPCL4P0DMR1 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HNRNPCL4P0DMR1 LINC01960-201ENST00000563759 1884 ntBASIC20.41■□□□□ 0.86
HNRNPCL4P0DMR1 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
HNRNPCL4P0DMR1 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
HNRNPCL4P0DMR1 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HNRNPCL4P0DMR1 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.41■□□□□ 0.86
HNRNPCL4P0DMR1 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HNRNPCL4P0DMR1 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.41■□□□□ 0.86
HNRNPCL4P0DMR1 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.41■□□□□ 0.86
HNRNPCL4P0DMR1 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HNRNPCL4P0DMR1 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HNRNPCL4P0DMR1 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.41■□□□□ 0.86
HNRNPCL4P0DMR1 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
HNRNPCL4P0DMR1 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms