Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
FREM3P0C091 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
FREM3P0C091 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
FREM3P0C091 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
FREM3P0C091 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
FREM3P0C091 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
FREM3P0C091 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
FREM3P0C091 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
FREM3P0C091 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
FREM3P0C091 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.1■□□□□ 0.81
FREM3P0C091 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
FREM3P0C091 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
FREM3P0C091 AC027682.1-201ENST00000562846 899 ntBASIC20.09■□□□□ 0.81
FREM3P0C091 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
FREM3P0C091 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.09■□□□□ 0.81
FREM3P0C091 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
FREM3P0C091 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
FREM3P0C091 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.09■□□□□ 0.81
FREM3P0C091 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
FREM3P0C091 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
FREM3P0C091 AC034268.1-201ENST00000441047 882 ntBASIC20.09■□□□□ 0.81
FREM3P0C091 AL499627.2-201ENST00000606283 725 ntBASIC20.09■□□□□ 0.81
FREM3P0C091 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
FREM3P0C091 AC004687.1-201ENST00000579003 1625 ntBASIC20.09■□□□□ 0.81
FREM3P0C091 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
FREM3P0C091 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.09■□□□□ 0.81
FREM3P0C091 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
FREM3P0C091 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.09■□□□□ 0.81
FREM3P0C091 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
FREM3P0C091 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
FREM3P0C091 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
FREM3P0C091 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
FREM3P0C091 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
FREM3P0C091 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.08■□□□□ 0.81
FREM3P0C091 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
FREM3P0C091 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.08■□□□□ 0.81
FREM3P0C091 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
FREM3P0C091 ANOS2P-203ENST00000472227 1816 ntBASIC20.08■□□□□ 0.8
FREM3P0C091 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.08■□□□□ 0.8
FREM3P0C091 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
FREM3P0C091 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
FREM3P0C091 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
FREM3P0C091 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.07■□□□□ 0.8
FREM3P0C091 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.07■□□□□ 0.8
FREM3P0C091 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
FREM3P0C091 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.07■□□□□ 0.8
FREM3P0C091 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
FREM3P0C091 LINC01529-204ENST00000636474 1715 ntBASIC20.07■□□□□ 0.8
FREM3P0C091 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.07■□□□□ 0.8
FREM3P0C091 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
FREM3P0C091 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
FREM3P0C091 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
FREM3P0C091 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
FREM3P0C091 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
FREM3P0C091 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
FREM3P0C091 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
FREM3P0C091 AC012676.1-201ENST00000574705 1949 ntBASIC20.06■□□□□ 0.8
FREM3P0C091 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.06■□□□□ 0.8
FREM3P0C091 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.06■□□□□ 0.8
FREM3P0C091 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.06■□□□□ 0.8
FREM3P0C091 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.06■□□□□ 0.8
FREM3P0C091 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
FREM3P0C091 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FREM3P0C091 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FREM3P0C091 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
FREM3P0C091 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FREM3P0C091 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
FREM3P0C091 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FREM3P0C091 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.06■□□□□ 0.8
FREM3P0C091 AC091305.1-201ENST00000479476 895 ntBASIC20.06■□□□□ 0.8
FREM3P0C091 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.06■□□□□ 0.8
FREM3P0C091 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.06■□□□□ 0.8
FREM3P0C091 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
FREM3P0C091 DUSP8P3-201ENST00000399571 1760 ntBASIC20.05■□□□□ 0.8
FREM3P0C091 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.05■□□□□ 0.8
FREM3P0C091 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.05■□□□□ 0.8
FREM3P0C091 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.05■□□□□ 0.8
FREM3P0C091 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
FREM3P0C091 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
FREM3P0C091 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
FREM3P0C091 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
FREM3P0C091 IRS3P-201ENST00000223076 1006 ntBASIC20.05■□□□□ 0.8
FREM3P0C091 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.05■□□□□ 0.8
FREM3P0C091 AC087623.3-201ENST00000607047 1098 ntBASIC20.05■□□□□ 0.8
FREM3P0C091 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
FREM3P0C091 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
FREM3P0C091 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FREM3P0C091 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
FREM3P0C091 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FREM3P0C091 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
FREM3P0C091 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
FREM3P0C091 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.04■□□□□ 0.8
FREM3P0C091 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.04■□□□□ 0.8
FREM3P0C091 AC012414.1-201ENST00000556676 535 ntBASIC20.04■□□□□ 0.8
FREM3P0C091 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
FREM3P0C091 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
FREM3P0C091 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
FREM3P0C091 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FREM3P0C091 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
FREM3P0C091 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms