Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 PREB-202ENST00000406567 1910 ntTSL 5 BASIC28.4■■■□□ 2.14
SNRPA1P09661 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC28.4■■■□□ 2.14
SNRPA1P09661 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC28.4■■■□□ 2.14
SNRPA1P09661 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC28.4■■■□□ 2.14
SNRPA1P09661 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC28.4■■■□□ 2.14
SNRPA1P09661 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
SNRPA1P09661 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC28.4■■■□□ 2.14
SNRPA1P09661 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC28.4■■■□□ 2.14
SNRPA1P09661 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC28.4■■■□□ 2.14
SNRPA1P09661 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC28.39■■■□□ 2.14
SNRPA1P09661 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
SNRPA1P09661 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
SNRPA1P09661 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC28.39■■■□□ 2.14
SNRPA1P09661 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC28.39■■■□□ 2.14
SNRPA1P09661 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC28.39■■■□□ 2.14
SNRPA1P09661 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC28.39■■■□□ 2.14
SNRPA1P09661 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC28.39■■■□□ 2.14
SNRPA1P09661 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC28.39■■■□□ 2.14
SNRPA1P09661 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC28.38■■■□□ 2.13
SNRPA1P09661 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
SNRPA1P09661 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC28.38■■■□□ 2.13
SNRPA1P09661 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC28.38■■■□□ 2.13
SNRPA1P09661 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC28.38■■■□□ 2.13
SNRPA1P09661 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC28.38■■■□□ 2.13
SNRPA1P09661 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC28.38■■■□□ 2.13
SNRPA1P09661 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
SNRPA1P09661 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
SNRPA1P09661 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC28.37■■■□□ 2.13
SNRPA1P09661 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC28.37■■■□□ 2.13
SNRPA1P09661 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC28.37■■■□□ 2.13
SNRPA1P09661 AC092437.1-201ENST00000624794 1048 ntBASIC28.37■■■□□ 2.13
SNRPA1P09661 AC068587.7-201ENST00000641602 218 ntBASIC28.37■■■□□ 2.13
SNRPA1P09661 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
SNRPA1P09661 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
SNRPA1P09661 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC28.36■■■□□ 2.13
SNRPA1P09661 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC28.36■■■□□ 2.13
SNRPA1P09661 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC28.36■■■□□ 2.13
SNRPA1P09661 MFF-208ENST00000409616 1247 ntTSL 5 BASIC28.36■■■□□ 2.13
SNRPA1P09661 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC28.36■■■□□ 2.13
SNRPA1P09661 NTF6G-201ENST00000591094 616 ntBASIC28.36■■■□□ 2.13
SNRPA1P09661 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
SNRPA1P09661 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC28.36■■■□□ 2.13
SNRPA1P09661 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC28.35■■■□□ 2.13
SNRPA1P09661 EI24-211ENST00000534546 1544 ntTSL 2 BASIC28.35■■■□□ 2.13
SNRPA1P09661 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
SNRPA1P09661 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC28.35■■■□□ 2.13
SNRPA1P09661 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
SNRPA1P09661 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC28.35■■■□□ 2.13
SNRPA1P09661 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC28.35■■■□□ 2.13
SNRPA1P09661 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC28.34■■■□□ 2.13
SNRPA1P09661 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
SNRPA1P09661 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
SNRPA1P09661 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC28.34■■■□□ 2.13
SNRPA1P09661 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
SNRPA1P09661 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
SNRPA1P09661 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC28.34■■■□□ 2.13
SNRPA1P09661 AL137784.2-201ENST00000607332 1000 ntBASIC28.34■■■□□ 2.13
SNRPA1P09661 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC28.34■■■□□ 2.13
SNRPA1P09661 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC28.34■■■□□ 2.13
SNRPA1P09661 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
SNRPA1P09661 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
SNRPA1P09661 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC28.34■■■□□ 2.13
SNRPA1P09661 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC28.33■■■□□ 2.13
SNRPA1P09661 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC28.33■■■□□ 2.13
SNRPA1P09661 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC28.33■■■□□ 2.13
SNRPA1P09661 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC28.33■■■□□ 2.13
SNRPA1P09661 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
SNRPA1P09661 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC28.33■■■□□ 2.13
SNRPA1P09661 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
SNRPA1P09661 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC28.33■■■□□ 2.12
SNRPA1P09661 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
SNRPA1P09661 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
SNRPA1P09661 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
SNRPA1P09661 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC28.32■■■□□ 2.12
SNRPA1P09661 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
SNRPA1P09661 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC28.32■■■□□ 2.12
SNRPA1P09661 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC28.32■■■□□ 2.12
SNRPA1P09661 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC28.32■■■□□ 2.12
SNRPA1P09661 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
SNRPA1P09661 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC28.32■■■□□ 2.12
SNRPA1P09661 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
SNRPA1P09661 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
SNRPA1P09661 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
SNRPA1P09661 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC28.32■■■□□ 2.12
SNRPA1P09661 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
SNRPA1P09661 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC28.31■■■□□ 2.12
SNRPA1P09661 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC28.31■■■□□ 2.12
SNRPA1P09661 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC28.31■■■□□ 2.12
SNRPA1P09661 RARRES2P11-201ENST00000635158 484 ntBASIC28.31■■■□□ 2.12
SNRPA1P09661 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC28.31■■■□□ 2.12
SNRPA1P09661 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC28.31■■■□□ 2.12
SNRPA1P09661 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
SNRPA1P09661 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC28.3■■■□□ 2.12
SNRPA1P09661 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC28.3■■■□□ 2.12
SNRPA1P09661 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC28.3■■■□□ 2.12
SNRPA1P09661 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC28.3■■■□□ 2.12
SNRPA1P09661 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC28.29■■■□□ 2.12
SNRPA1P09661 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
SNRPA1P09661 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC28.29■■■□□ 2.12
SNRPA1P09661 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms